PUBLICATION
In vivo conditions to identify prkci phosphorylation targets using the analog-sensitive kinase method in zebrafish
- Authors
- Cibrián Uhalte, E., Kirchner, M., Hellwig, N., Allen, J.J., Donat, S., Shokat, K.M., Selbach, M., and Abdelilah-Seyfried, S.
- ID
- ZDB-PUB-120709-6
- Date
- 2012
- Source
- PLoS One 7(6): e40000 (Journal)
- Registered Authors
- Abdelilah-Seyfried, Salim
- Keywords
- none
- MeSH Terms
-
- Adenosine Triphosphate/analogs & derivatives
- Adenosine Triphosphate/metabolism
- Amino Acid Sequence
- Animals
- Embryo, Nonmammalian/enzymology
- Enzyme Assays/methods*
- Isoenzymes/chemistry
- Isoenzymes/metabolism*
- Molecular Sequence Data
- Mutant Proteins/chemistry
- Phosphorylation
- Protein Kinase C/chemistry
- Protein Kinase C/metabolism*
- Substrate Specificity
- Sulfhydryl Compounds/metabolism
- Zebrafish/embryology
- Zebrafish/metabolism*
- PubMed
- 22768194 Full text @ PLoS One
Citation
Cibrián Uhalte, E., Kirchner, M., Hellwig, N., Allen, J.J., Donat, S., Shokat, K.M., Selbach, M., and Abdelilah-Seyfried, S. (2012) In vivo conditions to identify prkci phosphorylation targets using the analog-sensitive kinase method in zebrafish. PLoS One. 7(6):e40000.
Abstract
Protein kinase C iota is required for various cell biological processes including epithelial tissue polarity and organ morphogenesis. To gain mechanistic insight into different roles of this kinase, it is essential to identify specific substrate proteins in their cellular context. The analog-sensitive kinase method provides a powerful tool for the identification of kinase substrates under in vivo conditions. However, it has remained a major challenge to establish screens based on this method in multicellular model organisms. Here, we report the methodology for in vivo conditions using the analog-sensitive kinase method in a genetically-tractable vertebrate model organism, the zebrafish. With this approach, kinase substrates can uniquely be labeled in the developing zebrafish embryo using bulky ATPγS analogs which results in the thiophosphorylation of substrates. The labeling of kinase substrates with a thiophosphoester epitope differs from phosphoesters that are generated by all other kinases and allows for an enrichment of thiophosphopeptides by immunoaffinity purification. This study provides the foundation for using the analog-sensitive kinase method in the context of complex vertebrate development, physiology, or disease.
Genes / Markers
Expression
Phenotype
Mutations / Transgenics
Human Disease / Model
Sequence Targeting Reagents
Fish
Orthology
Engineered Foreign Genes
Mapping