ZFIN ID: ZDB-PUB-120125-12
Regulator of complement activation (RCA) group 2 gene cluster in zebrafish: identification, expression, and evolution
Wu, J., Li, H., and Zhang, S.
Date: 2012
Source: Functional & integrative genomics   12(2): 367-377 (Journal)
Registered Authors: Li, Hongyan
Keywords: complement, regulator of complement activation (RCA), group 2, gene cluster, evolution, zebrafish
MeSH Terms:
  • Amino Acid Sequence
  • Base Sequence
  • Cloning, Molecular
  • Complement System Proteins/genetics
  • Complement System Proteins/metabolism
  • Evolution, Molecular*
  • Gene Expression*
  • Genetic Linkage
  • Membrane Proteins/genetics*
  • Membrane Proteins/metabolism
  • Molecular Sequence Data
  • Multigene Family*
  • Phylogeny
  • Repetitive Sequences, Nucleic Acid
  • Sequence Analysis, DNA
  • Synteny
  • Zebrafish Proteins/genetics*
  • Zebrafish Proteins/metabolism
PubMed: 22252228 Full text @ Funct. Integr. Genomics
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ABSTRACT

The activation of the complement system is tightly regulated by a group of plasma and cell membrane-associated proteins for host cell protection. In humans, these regulatory protein genes are clustered in a region named the regulator of complement activation (RCA) gene locus and can be categorized into two groups. The group 1 gene cluster has been reported in zebrafish, but information regarding the RCA locus remains scarce in fish. Here we identified two closely linked RCA group 2 genes in zebrafish, ZRC1 and ZRC2, which had all the features characteristic of known RCA group 2 genes. Both ZRC1 and ZRC2 were closely linked to the PFKFB1 gene and located 17 Mkb downstream of the PFKFB2 gene; in contrast, RCA group 2 genes are closely linked to PFKFB2 in frogs, chickens, and humans. However, both the direction of the RCA group 2 genes relative to PFKFB2 and the order of the RCA group 2 gene-encoded proteins in zebrafish were comparable to those in frogs, chickens, and humans. ZRC1 and ZRC2 shared 71.1% identity to each other, implicating that they might have originated by gene duplication after the split of the fish/mammalian common ancestor. Moreover, ZRC1 and ZRC2 encoded a membrane-associated protein and a soluble protein, respectively, and displayed different expression patterns, suggesting that functional divergence has already occurred. This is the first report showing the presence of the RCA group 2 cluster as well as the membrane-associated complement regulatory protein in zebrafish, providing a better understanding of the origin and evolution of RCA proteins.

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