PUBLICATION

Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping

Authors
GOA curators, UniProt curators
ID
ZDB-PUB-110127-3
Date
2007
Source
Manually curated data : (Curation)
Registered Authors
Keywords
GO_REF:0000044
MeSH Terms
none
PubMed
none
Abstract
Transitive assignment of GO terms based on Swiss-Prot Subcellular Location vocabulary annotation. The UniProt Consortium has developed a Subcellular Location vocabulary (SPSL) to annotate UniProt Knowledgebase entries (in CC_SUBC LOCATION lines). The GOA curators at EBI have manually mapped this vocabulary to the GO cellular component ontology. This mapping file, spsl2go, is used to obtain corresponding GO terms for any UniPRotKB entry that has SPSL annotation; the mapping file is available is available from ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/external2go/spsl2go or http://www.geneontology.org/external2go/spsl2go.
Genes / Markers
Figures
Expression
Phenotype
Mutations / Transgenics
Human Disease / Model
Sequence Targeting Reagents
Fish
Antibodies
Orthology
Engineered Foreign Genes
Mapping