ZFIN ID: ZDB-PUB-101108-37
Identification and expression of liver-specific genes after LPS challenge in amphioxus: the hepatic cecum as liver-like organ and "pre-hepatic" acute phase response
Wang, Y., and Zhang, S.
Date: 2011
Source: Functional & integrative genomics   11(1): 111-118 (Journal)
Registered Authors:
Keywords: Amphioxus, Hepatic cecum, Liver-specific genes, Acute phase response, Transcription factors, Promoter analysis
MeSH Terms:
  • Acute-Phase Reaction/drug therapy*
  • Acute-Phase Reaction/metabolism*
  • Animals
  • Biomarkers/metabolism
  • Cecum/drug effects*
  • Cecum/metabolism
  • Chordata, Nonvertebrate/drug effects*
  • Chordata, Nonvertebrate/metabolism
  • Gene Expression Profiling
  • Lipopolysaccharides/pharmacology*
  • Liver/drug effects*
  • Liver/metabolism
  • Promoter Regions, Genetic/genetics
  • RNA, Messenger/genetics
  • RNA, Plant/genetics
  • Reverse Transcriptase Polymerase Chain Reaction
  • Transcription Factors/genetics
  • Zebrafish/metabolism
PubMed: 21052758 Full text @ Funct. Integr. Genomics
ABSTRACT
Liver is present in all vertebrates and central to many physiological processes including processing of nutrients from ingested food, plasma protein synthesis, hormone production, and detoxification. However, its evolutionary origin remains open to date. Liver is also the principal organ of acute phase response (APR) but when the vertebrate-like APR regulatory network emerges during the chordate evolution is unknown. By combining global genome survey and qRT-PCR data sets, here, we clearly demonstrate the presence of the 58 vertebrate (zebrafish) liver-specific genes in amphioxus (hepatic cecum-specific genes) that are expressed in a tissue-specific manner in the hepatic cecum, the homolog of liver. Among these 58 hepatic cecum-specific genes, 52 genes respond to lipopolysaccharide challenge, which show similar expression profiles in both zebrafish and amphioxus. In addition, searching for binding sites for HNF and APR-associated transcription factors in promoter sequences for all the 58 hepatic cecum-specific genes and the 52 APR-related genes suggests that both HNF factors and APR-associated transcription factors in amphioxus form regulatory networks similar to those observed in zebrafish, regulating the hepatic cecum-specific genes and APR-related genes, respectively, via binding to their binding sites in the promoter regions. These similarities in liver/hepatic cecum-specific genes, APR, and regulatory networks between amphioxus and zebrafish supports the idea that hepatic cecum in amphioxus is the "pre-hepatic" organ homologous to vertebrate liver and acts as an immunological organ, playing an important role in APR.
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