ZFIN Person: Inoue, Kunio

ZFIN ID: ZDB-PERS-960805-670

ZFIN ID: ZDB-PERS-960805-670

Inoue, Kunio

Email:	kunio@kobe-u.ac.jp
URL:
Affiliation:	Inoue Lab
Address:	Department of Biology Faculty of Science Kobe University 1-1 Rokkodaicho Kobe , 657-8501 Japan
Country:	Japan
Phone:	81-78-803-5725
Fax:	81-78-803-5720
ORCID ID:

BIOGRAPHY AND RESEARCH INTERESTS

PUBLICATIONS

Mishima, Y., Inoue, K. (2021) Tethered Function Assay to Study RNA-Regulatory Proteins in Zebrafish Embryos. Methods in molecular biology (Clifton, N.J.). 2218:347-354

Kobayashi, M., Tani-Matsuhana, S., Ohkawa, Y., Sakamoto, H., Inoue, K. (2017) DND protein functions as a translation repressor during zebrafish embryogenesis. Biochemical and Biophysical Research Communications. 484(2):235-240

Makino, S., Mishima, Y., Inoue, K., Inada, T. (2015) Roles of mRNA-fate modulators Dhh1 and Pat1 in TNRC6-dependent gene silencing recapitulated in yeast. The Journal of biological chemistry. 290(13):8331-47

Mishima, Y., Fukao, A., Kishimoto, T., Sakamoto, H., Fujiwara, T., and Inoue, K. (2012) Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 109(4):1104-1109

Tani, S., Kusakabe, R., Naruse, K., Sakamoto, H., and Inoue, K. (2010) Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development. Gene. 449(1-2):41-49

Takeda, Y., Mishima, Y., Fujiwara, T., Sakamoto, H., and Inoue, K. (2009) DAZL relieves miRNA-mediated repression of germline mRNAs by controlling poly(A) tail length in zebrafish. PLoS One. 4(10):e7513

Suzuki, H., Tsukahara, T., and Inoue, K. (2009) Localization of c-mos mRNA around the animal pole in the zebrafish oocyte with Zor-1/Zorba. Bioscience trends. 3(3):96-104

Kosaka, K., Kawakami, K., Sakamoto, H., and Inoue, K. (2007) Spatiotemporal localization of germ plasm RNAs during zebrafish oogenesis. Mechanisms of Development. 124(4):279-289

Uechi, T., Nakajima, Y., Nakao, A., Torihara, H., Chakraborty, A., Inoue, K., and Kenmochi, N. (2006) Ribosomal protein gene knockdown causes developmental defects in zebrafish. PLoS One. 1(1):e37

Mishima, Y., Giraldez, A.J., Takeda, Y., Fujiwara, T., Sakamoto, H., Schier, A.F., and Inoue, K. (2006) Differential Regulation of Germline mRNAs in Soma and Germ Cells by Zebrafish miR-430. Current biology : CB. 16(21):2135-2142

Giraldez, A.J., Mishima, Y., Rihel, J., Grocock, R.J., Van Dongen, S., Inoue, K., Enright, A.J., and Schier, A.F. (2006) Zebrafish MiR-430 Promotes Deadenylation and Clearance of Maternal mRNAs. Science (New York, N.Y.). 312(5770):75-79

Saito, T., Fujimoto, T., Maegawa, S., Inoue, K., Tanaka, M., Arai, K., and Yamaha, E. (2006) Visualization of primordial germ cells in vivo using GFP-nos1 3'UTR mRNA. The International journal of developmental biology. 50(8):691-699

Hashimoto, Y., Suzuki, H., Kageyama, Y., Yasuda, K., and Inoue, K. (2006) Bruno-like protein is localized to zebrafish germ plasm during the early cleavage stages. Gene expression patterns : GEP. 6(2):201-205

Hashimoto, Y., Maegawa, S., Nagai, T., Yamaha, E., Suzuki, H., Yasuda, K., and Inoue, K. (2004) Localized maternal factors are required for zebrafish germ cell formation. Developmental Biology. 268(1):152-161

Jin, Y., Suzuki, H., Maegawa, S., Endo, H., Sugano, S., Hashimoto, K., Yasuda, K., and Inoue, K. (2003) A vertebrate RNA-binding protein Fox-1 regulates tissue-specific splicing via the pentanucleotide GCAUG. The EMBO journal. 22(4):905-912

Maegawa, S., Yamashita, M., Yasuda, K., and Inoue, K. (2002) Zebrafish DAZ-like protein controls translation via the sequence 'GUUC'. Genes to cells : devoted to molecular & cellular mechanisms. 7(9):971-984

Suzuki, H., Jin, Y., Otani, H., Yasuda, K., and Inoue, K. (2002) Regulation of alternative splicing of alpha-actinin transcript by Bruno-like proteins. Genes to cells : devoted to molecular & cellular mechanisms. 7(2):133-141

Suzuki, H., Maegawa, S., Nishibu, T., Sugiyama, T., Yasuda, K., and Inoue, K. (2000) Vegetal localization of the maternal mRNA encoding an EDEN-BP/Bruno-like protein in zebrafish. Mechanisms of Development. 93(1-2):205-209

Maegawa, S., Yasuda, K., and Inoue, K. (1999) Maternal mRNA localization of zebrafish DAZ-like gene. Mechanisms of Development. 81(1-2):223-226

NON-ZEBRAFISH PUBLICATIONS
Fukao, A., Sasano, Y., Imataka, H., Inoue, K., Sakamoto, H., Sonenberg, N., Thoma, C & Fujiwara, T. The ELAV protein HuD stimulates cap-dependent translation in a poly(A)- and eIF4A-dependent manner. Mol. Cell (in press)

Hayashida, Y., Nishibu, T., Inoue, K., & Kurokawa, T. (2009) A useful approach to total analysis of RISC-associated RNA. BMC Research Notes 2, 169.

Hayashi, S, Akiyama, S., Tamaru, Y., Takeda, Y., Fujiwara, T., Inoue, K., Kobayashi, A., Maegawa, S., & Fukusaki, E. (2009) A novel application of metabolomics in vertebrate development. Biochem. Biophys. Res. Commun. 386, 268-72.

Suzuki, H., Tsukahara, T., & Inoue, K. (2009) Localization of c-mos mRNA around the animal pole in the zebrafish oocyte with Zor-1/Zorba. BioScience Trends 3, 96-104.

Fukumura, K., Taniguchi, I., Sakamoto, H., Ohno, M., and Inoue, K. (2009) U1-independent pre-mRNA splicing contributes to the regulation of alternative splicing. Nucleic Acids Res. 37, 1907-1914.

Sasano, Y., Hokii, Y., Inoue, K., Sakamoto, H., Ushida, C. and Fujiwara, T. (2008) Distribution of U3 small nucleolar RNA and fibrillarin during early embryogenesis in Caenorhabditis elegans. Biochimie 90, 898-907.

Fukumura, K., Kato, A., Jin, Y., Ideue, T., Hirose, T., Kataoka, N., Fujiwara, T., Sakamoto, H., and Inoue, K. (2007). Tissue-specific splicing regulator Fox-1 induces exon skipping by interfering E complex formation on the downstream intron of human F1gamma gene. Nucleic Acids Res. 35, 5303-5311.

Takasaki, T., Liu, Z., Habara, Y., Nishiwaki, K., Nakayama, J., Inoue, K., Sakamoto, H., and Strome, S. (2007). MRG-1, an autosome-associated protein, silences X-linked genes and protects germline immortality in Caenorhabditis elegans. Development 134, 757-767.

Saito, T., Fujimoto, T., Maegawa, S., Inoue, K., Tanaka, M., Arai, K., and Yamaha, E. (2006). Visualization of primordial germ cells in vivo using GFP-nos1 3'UTR mRNA. Int J Dev Biol 50, 691-699.

Otani, S., Kitauchi, T., Saito, T., Sakao, S., Maegawa, S., Inoue, K., Arai, K., and Yamaha, E. (2005). The formation of primordial germ cells from germline cells in spherical embryos derived from the blastodisc of 2-cell embryos in goldfish, Carassius auratus. Int J Dev Biol 49, 843-850.

Masuhiro, Y., Mezaki, Y., Sakari, M., Takeyama, K., Yoshida, T., Inoue, K., Yanagisawa, J., Hanazawa, S., O'Malley B, W., and Kato, S. (2005). Splicing potentiation by growth factor signals via estrogen receptor phosphorylation. Proc Natl Acad Sci U S A 102, 8126-8131.

Saito, K., Fujiwara, T., Katahira, J., Inoue, K., and Sakamoto, H. (2004). TAP/NXF1, the primary mRNA export receptor, specifically interacts with a neuronal RNA-binding protein HuD. Biochem Biophys Res Commun 321, 291-297.

Saijou, E., Fujiwara, T., Suzaki, T., Inoue, K., and Sakamoto, H. (2004). RBD-1, a nucleolar RNA-binding protein, is essential for Caenorhabditis elegans early development through 18S ribosomal RNA processing. Nucleic Acids Res 32, 1028-1036.

Otani, S., Maegawa, S., Inoue, K., Arai, K., and Yamaha, E. (2002). The germ cell lineage identified by vas-mRNA during the embryogenesis in goldfish. Zoolog Sci 19, 519-526.

Nakahata, S., Katsu, Y., Mita, K., Inoue, K., Nagahama, Y., and Yamashita, M. (2001). Biochemical identification of Xenopus Pumilio as a sequence-specific cyclin B1 mRNA-binding protein that physically interacts with a Nanos homolog, Xcat-2, and a cytoplasmic polyadenylation element-binding protein. J Biol Chem 276, 20945-20953.

Shiga, N., Takeshima, Y., Sakamoto, H., Inoue, K., Yokota, Y., Yokoyama, M., and Matsuo, M. (1997). Disruption of the splicing enhancer sequence within exon 27 of the dystrophin gene by a nonsense mutation induces partial skipping of the exon and is responsible for Becker muscular dystrophy. J Clin Invest 100, 2204-2210.

Artinger, M., Blitz, I., Inoue, K., Tran, U., and Cho, K. W. (1997). Interaction of goosecoid and brachyury in Xenopus mesoderm patterning. Mech Dev 65, 187-196.

Takabatake, T., Takahashi, T. C., Inoue, K., Ogawa, M., and Takeshima, K. (1996). Activation of two Cynops genes, fork head and sonic hedgehog, in animal cap explants. Biochem Biophys Res Commun 218, 395-401.

Watabe, T., Kim, S., Candia, A., Rothbacher, U., Hashimoto, C., Inoue, K., and Cho, K. W. (1995). Molecular mechanisms of Spemann's organizer formation: conserved growth factor synergy between Xenopus and mouse. Genes Dev 9, 3038-3050.

Inoue, K., Ohno, M., and Shimura, Y. (1995). Aspects of splice site selection in constitutive and alternative pre-mRNA splicing. Gene Expr 4, 177-182.

Hoshijima, K., Kohyama, A., Watakabe, I., Inoue, K., Sakamoto, H., and Shimura, Y. (1995). Transcriptional regulation of the Sex-lethal gene by helix-loop-helix proteins. Nucleic Acids Res 23, 3441-3448.

Sakamoto, H., Inoue, K., Higuchi, I., Ono, Y., and Shimura, Y. (1992). Control of Drosophila Sex-lethal pre-mRNA splicing by its own female-specific product. Nucleic Acids Res 20, 5533-5540.

Inoue, K., Hoshijima, K., Higuchi, I., Sakamoto, H., and Shimura, Y. (1992). Binding of the Drosophila transformer and transformer-2 proteins to the regulatory elements of doublesex primary transcript for sex-specific RNA processing. Proc Natl Acad Sci U S A 89, 8092-8096.

Hoshijima, K., Inoue, K., Higuchi, I., Sakamoto, H., and Shimura, Y. (1991). Control of doublesex alternative splicing by transformer and transformer-2 in Drosophila. Science 252, 833-836.

Inoue, K., Hoshijima, K., Sakamoto, H., and Shimura, Y. (1990). Binding of the Drosophila Sex-lethal gene product to the alternative splice site of transformer primary transcript. Nature 344, 461-463.

Watakabe, A., Inoue, K., Sakamoto, H., and Shimura, Y. (1989). A secondary structure at the 3' splice site affects the in vitro splicing reaction of mouse immunoglobulin mu chain pre-mRNAs. Nucleic Acids Res 17, 8159-8169.

Inoue, K., Ohno, M., Sakamoto, H., and Shimura, Y. (1989). Effect of the cap structure on pre-mRNA splicing in Xenopus oocyte nuclei. Genes Dev 3, 1472-1479.