ZFIN Person: Mueller, Thomas

ZFIN ID: ZDB-PERS-070208-5

Mueller, Thomas

Email:	Thomas.Mueller@ucsf.edu
URL:
Affiliation:	Wullimann Research Group and also: Guo Lab
Address:	Department of Biopharmaceutical Sciences Programs in Biological Sciences, Human Genetics, Pharmaceutical Sciences and Pharmacogenomics Wheeler Center for the Neurobiology of Addiction University of California San Francisco Mission Bay Rock Hall 1550 4th Street San Francisco, CA 94143-2811 USA
Country:	United States
Phone:	415-514-2662
Fax:	415-502-8177
ORCID ID:

BIOGRAPHY AND RESEARCH INTERESTS

PUBLICATIONS

Porter, B.A., Mueller, T. (2020) The Zebrafish Amygdaloid Complex - Functional Ground Plan, Molecular Delineation, and Everted Topology. Frontiers in neuroscience. 14:608

Horstick, E.J., Mueller, T., Burgess, H.A. (2016) Motivated state control in larval zebrafish: behavioral paradigms and anatomical substrates. Journal of neurogenetics. 30(2):122-32

Marquart, G.D., Tabor, K.M., Brown, M., Strykowski, J.L., Varshney, G.K., LaFave, M.C., Mueller, T., Burgess, S.M., Higashijima, S., Burgess, H.A. (2015) A 3D Searchable Database of Transgenic Zebrafish Gal4 and Cre Lines for Functional Neuroanatomy Studies. Frontiers in neural circuits. 9:78

Ishibashi, M., Manning, E., Shoubridge, C., Krecsmarik, M., Hawkins, T.A., Giacomotto, J., Zhao, T., Mueller, T., Bader, P.I., Cheung, S.W., Stankiewicz, P., Bain, N.L., Hackett, A., Reddy, C.C., Mechaly, A.S., Peers, B., Wilson, S.W., Lenhard, B., Bally-Cuif, L., Gecz, J., Becker, T.S., Rinkwitz, S. (2015) Copy number variants in patients with intellectual disability affect the regulation of ARX transcription factor gene. Human genetics. 134(11-12):1163-82

Marquart, G.D., Tabor, K.M., Brown, M., Strykowski, J.L., Varshney, G.K., LaFave, M.C., Mueller, T., Burgess, S.H., Higashijima, S., and Burgess, H.A. (2015) Enhancer Trap Transgenics. ZFIN Direct Data Submission.

Filippi, A., Mueller, T., and Driever, W. (2014) Vglut2 and gad expression reveal distinct patterns of dual GABAergic versus glutamatergic cotransmitter phenotypes of dopaminergic and noradrenergic neurons in the zebrafish brain. The Journal of comparative neurology. 522(9):2019-37

Haug, M.F., Gesemann, M., Mueller, T., and Neuhauss, S.C. (2013) Phylogeny and expression divergence of metabotropic glutamate receptor genes in the brain of zebrafish (Danio rerio). The Journal of comparative neurology. 521(7):1533-1560

Ronneberger, O., Liu, K., Rath, M., Rueβ, D., Mueller, T., Skibbe, H., Drayer, B., Schmidt, T., Filippi, A., Nitschke, R., Brox, T., Burkhardt, H., Driever, W. (2012) ViBE-Z: a framework for 3D virtual colocalization analysis in zebrafish larval brains. Nature Methods. 9(7):735-742

Mueller, T. (2012) What is the Thalamus in Zebrafish?. Frontiers in Neurogenesis. 6:64

Wullimann, M.F., Mueller, T., Distel, M., Babaryka, A., Grothe, B., and Köster, R.W. (2011) The long adventurous journey of rhombic lip cells in jawed vertebrates: a comparative developmental analysis. Frontiers in Neuroanatomy. 5:27

Mueller, T., Dong, Z., Berberoglu, M.A., and Guo, S. (2011) The dorsal pallium in Zebrafish, Danio rerio (Cyprinidae, Teleostei). Brain research. 1381:95-105

Osório, J., Mueller, T., Rétaux, S., Vernier, P., and Wullimann, M.F. (2010) Phylotypic expression of the bHLH genes Neurogenin2, Neurod, and Mash1 in the mouse embryonic forebrain. The Journal of comparative neurology. 518(6):851-871

Mueller, T., and Guo, S. (2009) The distribution of GAD67-mRNA in the adult zebrafish (teleost) forebrain reveals a prosomeric pattern and suggests previously unidentified homologies to tetrapods. The Journal of comparative neurology. 516(6):553-568

Berberoglu, M.A., Dong, Z., Mueller, T., and Guo, S. (2009) fezf2 expression delineates cells with proliferative potential and expressing markers of neural stem cells in the adult zebrafish brain. Gene expression patterns : GEP. 9(6):411-422

Peng, J., Wagle, M., Mueller, T., Mathur, P., Lockwood, B.L., Bretaud, S., and Guo, S. (2009) Ethanol-modulated camouflage response screen in zebrafish uncovers a novel role for cAMP and extracellular signal-regulated kinase signaling in behavioral sensitivity to ethanol. The Journal of neuroscience : the official journal of the Society for Neuroscience. 29(26):8408-8418

Mueller, T., and Wullimann, M.F. (2009) An evolutionary interpretation of teleostean forebrain anatomy. Brain, behavior and evolution. 74(1):30-42

Mueller, T., Wullimann, M.F., and Guo, S. (2008) Early teleostean basal ganglia development visualized by Zebrafish Dlx2a, Lhx6, Lhx7, Tbr2 (eomesa), and GAD67 gene expression. The Journal of comparative neurology. 507(2):1245-1257

Sive, H., Mueller, T., Wullimann, M.F., Kuwada, J.Y., Moorman, S.J., Haendel, M.A. (2006) ZFIN Anatomy Working Group: Nervous System. Manually curated data.

Mueller, T., Vernier, P., and Wullimann, M.F. (2006) A phylotypic stage in vertebrate brain development: GABA cell patterns in zebrafish compared with mouse. The Journal of comparative neurology. 494(4):620-634

Mueller, T., and Wullimann, M.F. (2005) Atlas of Early Zebrafish Brain Development: A Tool for Molecular Neurogenetics. Elsevier Science. :183p

Wullimann, M.F., and Mueller, T. (2004) Teleostean and mammalian forebrains contrasted: Evidence from genes to behavior. The Journal of comparative neurology. 475(2):143-162

Mueller, T., Vernier, P., and Wullimann, M.F. (2004) The adult central nervous cholinergic system of a neurogenetic model animal, the zebrafish Danio rerio. Brain research. 1011(2):156-169

Wullimann, M.F., and Mueller, T. (2004) Identification and morphogenesis of the eminentia thalami in the zebrafish. The Journal of comparative neurology. 471(1):37-48

Mueller, T., and Wullimann, M.F. (2003) Anatomy of neurogenesis in the early zebrafish brain. Brain research. Developmental brain research. 140(1):137-155

Wullimann, M.F., and Mueller, T. (2002) Expression of Zash-1a in the postembryonic zebrafish brain allows comparison to mouse Mash1 domains. Gene expression patterns : GEP. 1(3-4):187-192

Mueller, T., and Wullimann, M. (2002) BrdU-, neuroD (nrd)- and Hu-studies reveal unusual non-ventricular neurogenesis in the postembryonic zebrafish forebrain. Mechanisms of Development. 117(1-2):123-135

Mueller, T., and Wullimann, M.F. (2002) Expression domains of neuroD (nrd) in the early postembryonic zebrafish brain. Brain research bulletin. 57(3-4):377-379

NON-ZEBRAFISH PUBLICATIONS