ZFIN ID: ZDB-GENE-990415-98
Gene Name: homeobox A2b
Gene Symbol: hoxa2b
Sequence Ontology ID : SO:0000704

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Previous Names: hoxa2, etID309949.16 (1), Z-75

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 41 figures from 32 publications
Directly Submitted Expression Data: 6 figures (16 images) from Thisse et al., 2005 [eu715]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  hindbrain, hindbrain neural plate, hyoid neural crest, neural crest (all 29) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa36100 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-hoxa2b (2), MO2-hoxa2b (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxa2b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Microtia, hearing impairment, and cleft palate (AR) 612290
    ?Microtia with or without hearing impairment (AD) 612290
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356
  • InterPro:IPR001827
  • InterPro:IPR009057
  • InterPro:IPR017970
  • InterPro:IPR020479
  • PROSITE:PS00027
  • PROSITE:PS00032
  • PROSITE:PS50071
  • Pfam:PF00046
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxa2b-001 (1) 1914
    ottdart00000001850 (1) 1797
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxa2b
    Tg(hoxa2b:EGFP)
    MARKER RELATIONSHIPS
    hoxa2bContained in: [BAC] DKEY-45E15 (1) (order this)
    [PAC] BUSM1-31B14 (1) (order this)
    hoxa2bEncodes: [EST] eu715 (1)
    [cDNA] MGC:193940 (1) (order this), MGC:193947 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131106 (1) 1797bp
    Genomic GenBank:CR392024 (1) 183486bp
    Select Tool
    Polypeptide UniProtKB:B3DG99 363aa
    Sequence Clusters UniGene:82597 (1)
    Sequence Information (all 29)
    OTHER hoxa2b GENE PAGES
  • Gene:30325 (1)
  • VEGA:OTTDARG00000001732 (1)
  • VEGA:OTTDARG00000027661 (1)
  • Ensembl(GRCz10):ENSDARG00000023031 (1)
  • ORTHOLOGY for hoxa2b (Chr: 16)
    CITATIONS (85)