ZFIN ID: ZDB-GENE-990415-78
Gene Name: forkhead box A1
Gene Symbol: foxa1    Nomenclature History

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Previous Names: fkd7 (1), forkhead-7

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Exhibits transcription regulatory region sequence-specific DNA binding activity. Involved in axial mesoderm morphogenesis. Predicted to localize to nucleus. Is expressed in several structures, including central nervous system; chordo neural hinge; digestive system; endoderm; and liver primordium. Orthologous to human FOXA1 (forkhead box A1).
Genome Resources: Alliance (1),  Gene:30541 (1),  Ensembl(GRCz11):ENSDARG00000102138 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-foxa1 N/A 3
MO2-foxa1 N/A 1
MO3-foxa1 N/A 1
DISEASE ASSOCIATED WITH foxa1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH foxa1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process axial mesoderm morphogenesis (more)
Cellular Component nucleus (more)
Molecular Function transcription regulatory region sequence-specific DNA binding (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA foxa1-201 (1)    Ensembl 1891
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM foxa1 No data available
MARKER RELATIONSHIPS
foxa1 Contained in: [BAC] DKEYP-114A12 (1)
foxa1 Encodes: [cDNA] MGC:65744 (1), MGC:76828 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131284 (1) 1878 nt
Genomic GenBank:CR753895 (1) 173508 nt
Select Tool
Polypeptide UniProtKB:Q6P0C9 (1) 427 aa
Sequence Information (all 17)
ORTHOLOGY for foxa1 ( Chr: 17 )
CITATIONS (99)