ZFIN ID: ZDB-GENE-990415-277
Gene Name: forkhead box N4
Gene Symbol: foxn4
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: whn, sli, slipjig, whna (1), winged helix nude

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 10 figures from 8 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
s644 Insertion Unknown Frameshift, Premature Stop ENU
sa33562 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tm117c Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 8 figures from 5 publications
    Observed in:
    DISEASE ASSOCIATED WITH foxn4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH foxn4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001766 (1)
  • InterPro:IPR030456 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR036390 (1)
  • PROSITE:PS00658 (1)
  • PROSITE:PS50039 (1)
  • Pfam:PF00250 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA foxn4-001 (1) 2752
    ncRNA foxn4-002 (1) 614
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM foxn4 No data available
    MARKER RELATIONSHIPS
    foxn4Contained in: [BAC] CH211-250O15 (1) (order this), DKEY-189P24 (1) (order this)
    foxn4Encodes: [cDNA] MGC:158202 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131099 (1) 2762bp
    Genomic GenBank:BX510366 (1) 179350bp
    Select Tool
    Polypeptide UniProtKB:A2BGM5 (1) 550aa
    Sequence Clusters UniGene:81266 (1)
    Sequence Information (all 29)
    OTHER foxn4 GENE PAGES
  • Alliance (1)
  • Gene:30315 (1)
  • VEGA:OTTDARG00000015990 (1)
  • Ensembl(GRCz11):ENSDARG00000010591 (2)
  • ORTHOLOGY for foxn4 (Chr: 5)
    CITATIONS (45)