ZFIN ID: ZDB-GENE-990415-269
Gene Name: alpha-tropomyosin
Gene Symbol: tpma
Sequence Ontology ID : SO:0000704

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Previous Names: tm, fb37a09, tropomyosin alpha chain, wu:fb37a09 (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 37 figures from 26 publications
Directly Submitted Expression Data: 7 figures (17 images) from Thisse et al., 2004 [MGC:77897]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Adult (90d-730d, breeding adult)
  adaxial cell, cephalic musculature, fast muscle cell, fast muscle cell myofibril (all 19) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents: MO1-tpma (1)
PHENOTYPE
Data: Fig. 2 from Gieger et al., 2011
Observed in: myeloid cell development
DISEASE ASSOCIATED WITH tpma HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process myeloid cell development (more)
Cellular Component actin cytoskeleton (more)
Molecular Function actin filament binding (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000533 (1)
  • PROSITE:PS00326 (1)
  • Pfam:PF00261 (1)
  • Pfam:PF12718 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000063548 (1) 753
    tpma-001 (1) 1618
    tpma-002 (1) 1407
    tpma-003 (1) 721
    tpma-005 (1) 487
    tpma-006 (1) 529
    tpma-007 (1) 639
    tpma-008 (1) 751
    tpma-009 (1) 812
    tpma-010 (1) 3089
    tpma-011 (1) 631
    tpma-012 (1) 402
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tpma
    Tg(-4.0tpma:EGFP), Tg(tpma:KALTA4,4xUAS:EGFP)
    MARKER RELATIONSHIPS
    tpmaContained in: [BAC] CH73-148P15 (1) (order this)
    [PAC] BUSM1-132M23 (order this)
    tpmaEncodes: [EST] fb37a09 (1)
    [cDNA] MGC:77897 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131105 (1) 1406bp
    Genomic GenBank:AL845510 (1) 101241bp
    Select Tool
    Polypeptide UniProtKB:P13104 (1) 284aa
    Sequence Clusters UniGene:47559 (1)
    Sequence Information (all 34)
    OTHER tpma GENE PAGES
  • Alliance (1)
  • Gene:30324 (1)
  • VEGA:OTTDARG00000002206 (1)
  • VEGA:OTTDARG00000043761 (1)
  • Ensembl(GRCz10):ENSDARG00000033683 (1)
  • ORTHOLOGY for tpma (Chr: 7)
    CITATIONS (70)