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ZIRC
ZFIN ID: ZDB-GENE-980526-52
Gene Name: paired box 3a
Gene Symbol: pax3a
Sequence Ontology ID : SO:0000704

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Previous Names: pax3 (1), etID309899.2 (1), zgc:92547

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity. Involved in enteric nervous system development; neural crest cell migration; and xanthophore differentiation. Localizes to the nucleus. Human  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011736Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la014990Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la014991Tg Transgenic Insertion Unknown Unknown DNA
    sa33020 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39931 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH pax3a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    alveolar rhabdomyosarcoma Rhabdomyosarcoma 2, alveolar 268220
    craniofacial-deafness-hand syndrome Craniofacial-deafness-hand syndrome 122880
    Waardenburg syndrome type 1 Waardenburg syndrome, type 1 193500
    Waardenburg syndrome type 3 Waardenburg syndrome, type 3 148820
    DISEASE ASSOCIATED WITH pax3a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process developmental pigmentation (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 9)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pax3a-202 (1) 2713
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pax3a
    MARKER RELATIONSHIPS
    pax3aContained in: [BAC] DKEY-20F20 (1) (order this)
    pax3aEncodes: [cDNA] MGC:92547 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131277 (1) 2734bp
    Genomic GenBank:BX085193 (1) 246911bp Blast at MegaBLAST
    Polypeptide UniProtKB:O57416 (1) 509aa
    Sequence Clusters UniGene:75806 (1)
    Sequence Information (all 17)
    ORTHOLOGY for pax3a (Chr: 2)
    CITATIONS (105)