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ZIRC
ZFIN ID: ZDB-GENE-980526-395
Gene Name: SRY-box transcription factor 11a
Gene Symbol: sox11a
Sequence Ontology ID : SO:0001217

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Previous Names: cb237 (1), etID309973.17 (1), id:ibd2104 (1), wu:fb16g02 (1), zgc:136533

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in brain development; camera-type eye development; and negative regulation of smoothened signaling  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH sox11a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
autosomal dominant non-syndromic intellectual disability 27 Coffin-Siris syndrome 9 615866
DISEASE ASSOCIATED WITH sox11a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process camera-type eye morphogenesis (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 14)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA sox11a-201 (1) 3298
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
MARKER RELATIONSHIPS
sox11a Contained in: [BAC] CH211-169B18 (1) (order this)
sox11a Encodes: [EST] cb237 (1) (order this), fb16g02 (1) (order this), ibd2104 (1) (order this)
[cDNA] MGC:136533 (1) (order this), MGC:162570 (1) (order this), MGC:191544 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_131336 (1) 3280 bp
Genomic GenBank:AL929378 (1) 169874 bp
Select Tool
Polypeptide UniProtKB:Q9I9C8 (1) 354 aa
Sequence Clusters UniGene:4763 (1)
Sequence Information (all 29)
ORTHOLOGY for sox11a ( Chr: 17 )
CITATIONS (49)