ZFIN ID: ZDB-GENE-110411-148
Gene Name: ornithine aminotransferase
Gene Symbol: oat    Nomenclature History

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Previous Name: si:dkey-68e16.4

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have identical protein binding activity; ornithine-oxo-acid transaminase activity; and pyridoxal phosphate binding activity. Predicted to be involved in arginine catabolic process to glutamate and arginine catabolic process to proline via ornithine. Predicted to localize to cytoplasm. Human ortholog(s) of this gene implicated in gyrate atrophy. Orthologous to human OAT (ornithine aminotransferase).
Genome Resources: Alliance (1),  Gene:572518 (1),  Ensembl(GRCz11):ENSDARG00000078425 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH oat HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
gyrate atrophy Alliance Gyrate atrophy of choroid and retina with or without ornithinemia 258870
DISEASE ASSOCIATED WITH oat VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process arginine catabolic process to glutamate (more)
Cellular Component cytoplasm (more)
Molecular Function catalytic activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA oat-202 (1)    Ensembl 1830
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM oat No data available
MARKER RELATIONSHIPS
oat Contained in: [BAC] DKEY-68E16 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001317170 (1)
Genomic GenBank:AL953868 (1) 182445 nt
Select Tool
Polypeptide UniProtKB:F8W5L3 (1) 444 aa
Sequence Information (all 6)
ORTHOLOGY for oat ( Chr: 12 )
CITATIONS (15)