| ZFIN ID: ZDB-GENE-070705-185 |
| Gene Name: | ATCAY kinesin light chain interacting caytaxin a | |||||||||||||
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| Gene Symbol: | atcaya Nomenclature History |
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Attributions
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| Previous Names: | BNIP-H (1), caytaxin (1), si:ch211-63j24.4, si:dkey-49m19.1 | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 22 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to have exopolyphosphatase activity. Involved in regulation of cholinergic synaptic transmission. Predicted to localize to cytoplasm. Is expressed in brain; central nervous system; and neurons. Human ortholog(s) of this gene implicated in Cayman type cerebellar ataxia and cerebellar ataxia. Orthologous to human ATCAY (ATCAY kinesin light chain interacting caytaxin). | |||||||||||||
| Genome Resources: | Alliance (1), Gene:565827 (1), Ensembl(GRCz11):ENSDARG00000071678 (2) | |||||||||||||
| All Expression Data: | 9 figures from 2 publications |
| Directly Submitted Expression Data: | 8 figures (24 images) from Rauch et al., 2003 [cegs2561] |
| Wild-type Stages, Structures: | Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult) |
| High Throughput Expression: | GEO (1) , Expression Atlas (1) |
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
| Targeting Reagent | Created Alleles | Publications |
|---|---|---|
| MO1-atcaya | N/A | 1 |
| MO2-atcaya | N/A | 1 |
PHENOTYPE
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Cayman type cerebellar ataxia | Alliance | Ataxia, cerebellar, Cayman type | 601238 |
GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Biological Process | regulation of synaptic transmission, cholinergic (more) |
| Cellular Component | cytoplasm (more) |
| Molecular Function | exopolyphosphatase activity (more) |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
atcaya-202
(1)
|
2206 |
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| Browsers: NCBI, Ensembl, ZFIN |
INTERACTIONS AND PATHWAYS
ANTIBODIES
No data available
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM atcaya
No data available
MARKER RELATIONSHIPS
| atcaya Contained in: | [BAC] CH211-63J24 (1), DKEY-49M19 (1) (order this) |
| atcaya Encodes: | [EST] cegs2561 (1) (order this) |
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:XM_009295950 (1) |
Select Tool
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| Genomic | GenBank:BX649252 (1) | 205949 nt | Blast at MegaBLAST |
| Polypeptide | UniProtKB:A5WV31 (1) | 367 aa |
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ORTHOLOGY for atcaya (
Chr:
22
)
CITATIONS (19)