ZFIN ID: ZDB-GENE-070402-3
Gene Name: transmembrane protein 237a
Gene Symbol: tmem237a
Sequence Ontology ID : SO:0000704

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Previous Names: als2cr4, als2cr4a, si:dkey-33m14.6

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in convergent extension involved in gastrulation; predicted to localize to the ciliary transition zone; orthologous to human TMEM237 (transmembrane protein 237).
GENE EXPRESSION
All Expression Data: Fig. S8 from Huang et al., 2011
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tmem237a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Joubert syndrome 14 Joubert syndrome 14 614424
DISEASE ASSOCIATED WITH tmem237a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process convergent extension involved in gastrulation (more)
Cellular Component ciliary transition zone (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR029409 (1)
  • Pfam:PF15383 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tmem237a-001 (1) 1398
    tmem237a-002 (1) 872
    aberrant processed transcript tmem237a-003 (1) 1291
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tmem237a No data available
    MARKER RELATIONSHIPS
    tmem237aContained in: [BAC] DKEY-33M14 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001319136 (1)
    Genomic GenBank:BX571704 (1) 219065bp Blast at MegaBLAST
    Polypeptide UniProtKB:E9QFD7 (1) 276aa
    Sequence Clusters UniGene:83340 (1)
    Sequence Information (all 16)
    OTHER tmem237a GENE PAGES
  • Alliance (1)
  • Gene:557237 (1)
  • VEGA:OTTDARG00000025591 (1)
  • Ensembl(GRCz11):ENSDARG00000041735 (2)
  • ORTHOLOGY for tmem237a (Chr: 9)
    CITATIONS (16)