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ZIRC
ZFIN ID: ZDB-GENE-060526-68
Gene Name: Fraser extracellular matrix complex subunit 1
Gene Symbol: fras1
Sequence Ontology ID : SO:0000704

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Previous Names: id:ibd5080, pif (1), pinfin (1), si:ch211-191a6.5, wu:fc10b09

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in several processes, including basement membrane organization; embryonic viscerocranium morphogenesis; and epithelial structure maintenance. Predicted to localize to the integral component  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b1048 Point Mutation Unknown Premature Stop ENU
b1130 Point Mutation Unknown Premature Stop ENU
la025056Tg Transgenic Insertion Unknown Unknown DNA
la025057Tg Transgenic Insertion Unknown Unknown DNA
mn0156Gt Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14516 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17510 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20491 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20492 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20493 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25308 Point Mutation Unknown Premature Stop ENU
    sa26535 Point Mutation Unknown Premature Stop ENU
    sa33662 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33663 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33664 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40517 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45217 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • te262d Point Mutation Intron 42 Cryptic Acceptor Splice Site, Frameshift, Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tj16 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tm95b Point Mutation Unknown Missense ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tr274 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH fras1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Fraser syndrome 1 219000
    DISEASE ASSOCIATED WITH fras1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process epithelial structure maintenance (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 9)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA fras1-002 (1) 505
    mRNA fras1-203 (1) 12999
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM fras1 No data available
    MARKER RELATIONSHIPS
    fras1Contained in: [BAC] CH211-132F12 (1) (order this), CH211-191A6 (1) (order this), DKEY-29B15 (1) (order this)
    fras1Encodes: [EST] fc10b09, ibd5080 (order this), IMAGE:7159429 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001130840 (1) 13101bp
    Genomic GenBank:BX571800 (1) 195520bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IQJ3 (1) 4003aa
    Sequence Clusters UniGene:77902 (1)
    Sequence Information (all 35)
    ORTHOLOGY for fras1 (Chr: 5)
    CITATIONS (34)