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ZIRC
ZFIN ID: ZDB-GENE-051127-5
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Gene Name: solute carrier family 7 member 7
Gene Symbol: slc7a7
Sequence Ontology ID : SO:0000704

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Previous Names: unm t30713, unm_t30713, zgc:123300

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have L-amino acid transmembrane transporter activity. Involved in microglia development. Predicted to localize to the integral component of membrane. Used to study lysinuric protein  ...
GENE EXPRESSION
All Expression Data: 4 figures from 4 publications
Wild-type Stages, Structures: Segmentation:26+ somites (22.0h-24.0h) to Larval:Day 4 (96.0h-120.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011498Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa15030 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa44653 Point Mutation Unknown Unknown ENU
    t30713 Point Mutation Acceptor Splice Site of Intron 4 Splice Site, Exon Loss of Exon 5, Frameshift, Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
    • Targeting reagents:
    PHENOTYPE
    Data: 3 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH slc7a7 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    lysinuric protein intolerance Lysinuric protein intolerance 222700
    DISEASE ASSOCIATED WITH slc7a7 VIA EXPERIMENTAL MODELS
    Human Disease Fish Conditions Citations
    lysinuric protein intolerance slc7a7t30713/t30713 standard conditions Rossi et al., 2015
    WT + MO1-slc7a7 standard conditions Rossi et al., 2015
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process microglia development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function transmembrane transporter activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002293 (1)
    		•
  • Pfam:PF13520 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc7a7-201 (1) 2395
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slc7a7
    MARKER RELATIONSHIPS
    slc7a7Contained in: [BAC] CH211-212K18 (order this)
    slc7a7Encodes: [cDNA] MGC:123300 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001037559 (1) 2409bp
    Select Tool
    Genomic GenBank:CR847902 (1) 226255bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1R8V8 (1) 501aa
    Select Tool
    Sequence Clusters UniGene:86853 (1)
    Sequence Information (all 11)
    OTHER slc7a7 GENE PAGES
  • Alliance (1)
  • Gene:641560 (1)
  • VEGA:OTTDARG00000027489 (1)
  • Ensembl(GRCz11):ENSDARG00000055226 (1)
    • ORTHOLOGY for slc7a7 (Chr: 7)
    CITATIONS (31)