ZFIN ID: ZDB-GENE-050506-59
Gene Name: non-SMC condensin I complex, subunit D2
Gene Symbol: ncapd2
Sequence Ontology ID : SO:0000704

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Previous Names: cap-d2 (1), im:6902697, si:dkey-175g20.1, wu:fc13f08, wu:fx06e10

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Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [IMAGE:6902697]
Wild-type Stages, Structures: Blastula:512-cell (2.75h-3.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6859 Point Mutation Unknown Premature Stop ENU
sa12163 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19860 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from Seipold et al., 2009
    Observed in:
    DISEASE ASSOCIATED WITH ncapd2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Microcephaly 21, primary, autosomal recessive 617983
    DISEASE ASSOCIATED WITH ncapd2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mitotic sister chromatid segregation (more)
    Cellular Component nucleus (more)
    Molecular Function chromatin binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007673 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR024324 (1)
  • InterPro:IPR026971 (1)
  • InterPro:IPR032682 (1)
  • Pfam:PF12717 (1)
  • Pfam:PF12922 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ncapd2-001 (1) 4412
    ncRNA ncapd2-002 (1) 746
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ncapd2 No data available
    MARKER RELATIONSHIPS
    ncapd2Contained in: [BAC] CH73-60L17 (1) (order this), DKEY-175G20 (1) (order this)
    ncapd2Encodes: [EST] fc13f08, fx06e10, IMAGE:6902697 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001162502 (1)
    Genomic GenBank:CR788281 (1) 138235bp
    Select Tool
    Polypeptide UniProtKB:A2RV05 (1) 1414aa
    Sequence Clusters UniGene:150361 (1)
    Sequence Information (all 29)
    OTHER ncapd2 GENE PAGES
  • Alliance (1)
  • Gene:552978 (1)
  • VEGA:OTTDARG00000025418 (1)
  • Ensembl(GRCz11):ENSDARG00000005058 (2)
  • ORTHOLOGY for ncapd2 (Chr: 2)
    CITATIONS (22)