ZFIN ID: ZDB-GENE-050506-59
Gene Name: non-SMC condensin I complex, subunit D2
Gene Symbol: ncapd2    Nomenclature History

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Previous Names: cap-d2 (1), im:6902697, si:dkey-175g20.1, wu:fc13f08, wu:fx06e10

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have chromatin binding activity and histone binding activity. Involved in mitotic sister chromatid segregation. Predicted to localize to condensed chromosome, centromeric region and nuclear condensin complex. Is expressed in nervous system; optic cup; pectoral fin; pharyngeal arch 3-7 skeleton; and proliferative region. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly. Orthologous to human NCAPD2 (non-SMC condensin I complex subunit D2).
Genome Resources: Alliance (1),  Gene:552978 (1),  Ensembl(GRCz11):ENSDARG00000005058 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6859 Point Mutation Unknown Premature Stop ENU
sa12163 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19860 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-ncapd2 N/A 1
    DISEASE ASSOCIATED WITH ncapd2 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    ?Microcephaly 21, primary, autosomal recessive 617983
    DISEASE ASSOCIATED WITH ncapd2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mitotic sister chromatid segregation (more)
    Cellular Component nucleus (more)
    Molecular Function chromatin binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ncapd2-201 (1)    Ensembl 4412
    ncRNA ncapd2-002 (1)    Ensembl 746
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ncapd2 No data available
    MARKER RELATIONSHIPS
    ncapd2 Contained in: [BAC] CH73-60L17 (1), DKEY-175G20 (1) (order this)
    ncapd2 Encodes: [EST] fc13f08, fx06e10, IMAGE:6902697 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001162502 (1)
    Genomic GenBank:CR788281 (1) 138235 nt
    Select Tool
    Polypeptide UniProtKB:A2RV05 (1) 1414 aa
    Sequence Information (all 28)
    ORTHOLOGY for ncapd2 ( Chr: 2 )
    CITATIONS (24)