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ZIRC
ZFIN ID: ZDB-GENE-050417-85
Gene Name: rhomboid domain containing 1
Gene Symbol: rhbdd1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:110266

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have serine-type endopeptidase activity. Predicted to localize to the integral component of membrane. Orthologous to human RHBDD1 (rhomboid domain containing 1).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110266]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35964 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rhbdd1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rhbdd1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function serine-type endopeptidase activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR022764 (1)
  • InterPro:IPR035952 (1)
  • Pfam:PF01694 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rhbdd1-201 (1) 1641
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rhbdd1 No data available
    MARKER RELATIONSHIPS
    rhbdd1Contained in: [BAC] DKEYP-110B2 (1)
    rhbdd1Encodes: [cDNA] MGC:110266 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017614 (1) 1649bp
    Genomic GenBank:CT027718 (1) 39604bp
    Select Tool
    Polypeptide UniProtKB:F1QUY6 (1) 335aa
    Sequence Clusters UniGene:92577 (1)
    Sequence Information (all 13)
    ORTHOLOGY for rhbdd1 (Chr: 15)
    CITATIONS (14)