ZFIN Gene: znf45l

ZFIN ID: ZDB-GENE-050320-63

ZFIN ID: ZDB-GENE-050320-63

Gene Name:

zinc finger 45 like

Gene Symbol:

znf45l Nomenclature History

Previous Name:

zgc:112958 (1)

Gene Type:

protein_coding_gene

Location:

Chr: 22 Mapping Details/Browsers

Description:

Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in pharyngeal arch 3-7.

Genome Resources:

Alliance (1), Gene:541369 (1), Ensembl(GRCz11):ENSDARG00000105056 (1)

GENE EXPRESSION
All Expression Data:	2 figures from 2 publications
Directly Submitted Expression Data:	1 figure (1 image) from Thisse et al., 2004 [MGC:112958]
Wild-type Stages, Structures:	Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
	pharyngeal arch 3-7 whole organism

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
la028431Tg	Transgenic Insertion	Unknown	Unknown	DNA	Zebrafish International Resource Center (ZIRC) (order this)
sa37406	Point Mutation	Unknown	Premature Stop	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)

Sequence Targeting Reagents

Targeting Reagent	Created Alleles	Publications
MO1-znf45l, si:ch211-103a14.1, zgc:171435, si:dkey-1b17.8, zgc:113336	N/A	2
MO2-znf45l	N/A	1

PHENOTYPE

Data:	text only from Chen et al., 2014
Observed in:	post-vent region whole organism anterior region whole organism

DISEASE ASSOCIATED WITH znf45l HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH znf45l VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Biological Process	regulation of transcription by RNA polymerase II (more)
Cellular Component	nucleus (more)
Molecular Function	metal ion binding (more)

GO Terms (all 7)

PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available

TRANSCRIPTS No data available

INTERACTIONS AND PATHWAYS

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM znf45l No data available

MARKER RELATIONSHIPS

znf45l Contained in:	[BAC] DKEYP-53D3
znf45l Encodes:	[cDNA] MGC:112958 (1)

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001013496 (1)	2269 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX322657 (1)	126381 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A0R4IW81 (1)	407 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

Sequence Information (all 18)

ORTHOLOGY for znf45l ( Chr: 22 )

CITATIONS (19)

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