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ZIRC
ZFIN ID: ZDB-GENE-050208-651
Gene Name: extracellular matrix protein 2, female organ and adipocyte specific
Gene Symbol: ecm2    Nomenclature History

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Previous Name: si:dkey-42i9.2

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to have collagen V binding activity and heparin binding activity. Predicted to be involved in extracellular matrix organization and positive regulation of cell-substrate adhesion. Predicted to localize to the extracellular matrix. Is expressed in apical ectodermal ridge pectoral fin bud; fin fold pectoral fin bud; median fin fold; pectoral fin; and pharyngeal arch. Orthologous to human ECM2 (extracellular matrix protein 2).
Genome Resources: Alliance (1),  Gene:558224 (1),  Ensembl(GRCz11):ENSDARG00000071549 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014136Tg Transgenic Insertion Unknown Unknown DNA
sa25177 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ecm2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ecm2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process extracellular matrix organization (more)
Cellular Component extracellular matrix (more)
Molecular Function collagen V binding (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ecm2-201 (1)    Ensembl 2908
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ecm2 No data available
MARKER RELATIONSHIPS
ecm2 Contained in: [BAC] DKEY-42I9 (1) (order this)
ecm2 Encodes: [EST] eu559 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_681415 (1)
Genomic GenBank:BX465868 (1) 222195 bp Blast at MegaBLAST
Polypeptide UniProtKB:F1R2S9 (1) 731 aa
Sequence Clusters UniGene:85798 (1)
Sequence Information (all 13)
ORTHOLOGY for ecm2 ( Chr: 22 )
CITATIONS (17)