ZFIN ID: ZDB-GENE-050208-149
Gene Name: choline kinase alpha
Gene Symbol: chka    Nomenclature History

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Previous Names: im:7143625, si:dkey-12e7.3, wu:fd46h01

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Is expressed in swim bladder. Orthologous to human CHKA (choline kinase alpha).
Genome Resources: Alliance (1),  Gene:558499 (1),  Ensembl(GRCz11):ENSDARG00000041078 (1)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7143625]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 4 (96.0h-120.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa43097 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH chka HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH chka VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA chka-201 (1)    Ensembl 3279
    chka-202 (1)    Ensembl 1257
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM chka No data available
    MARKER RELATIONSHIPS
    chka Contained in: [BAC] DKEY-12E7 (1) (order this)
    chka Encodes: [EST] fd46h01, IMAGE:7143625 (1)
    [cDNA] MGC:194818 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001044865 (1) 3279 nt
    Genomic GenBank:BX571884 (1) 101906 nt
    Select Tool
    Polypeptide UniProtKB:B3DIC9 (1) 418 aa
    Sequence Information (all 23)
    ORTHOLOGY for chka ( Chr: 18 )
    CITATIONS (21)