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General Information
ZIRC
ZFIN ID: ZDB-GENE-050208-149
Gene Name: choline kinase alpha
Gene Symbol: chka
Sequence Ontology ID : SO:0000704

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Previous Names: im:7143625, si:dkey-12e7.3, wu:fd46h01

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human CHKA (choline kinase alpha).
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7143625]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 4 (96.0h-120.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa43097 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH chka HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH chka VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011009 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA chka-201 (1) 3279
    chka-202 (1) 1257
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM chka No data available
    MARKER RELATIONSHIPS
    chkaContained in: [BAC] DKEY-12E7 (1) (order this)
    chkaEncodes: [EST] fd46h01, IMAGE:7143625 (1) (order this)
    [cDNA] MGC:194818 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044865 (1) 3279bp
    Genomic GenBank:BX571884 (1) 101906bp
    Select Tool
    Polypeptide UniProtKB:B3DIC9 (1) 418aa
    Sequence Clusters UniGene:108026 (1)
    Sequence Information (all 25)
    ORTHOLOGY for chka (Chr: 18)
    CITATIONS (19)