ZFIN ID: ZDB-GENE-041114-196
Gene Name: myosin binding protein C, slow type
Gene Symbol: mybpc1
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: smbpc (1), zgc:92073 (1)

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 7 figures from 5 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024461Tg Transgenic Insertion Unknown Unknown DNA
la024462Tg Transgenic Insertion Unknown Unknown DNA
sa153 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8977 Point Mutation Unknown Premature Stop ENU
    sa20253 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 4 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH mybpc1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    distal arthrogryposis Arthrogryposis, distal, type 1B 614335
    Lethal congenital contracture syndrome 4 614915
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process skeletal muscle fiber development (more)
    Cellular Component M band (more)
    Molecular Function actin filament binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003598 (1)
  • InterPro:IPR003599 (1)
  • InterPro:IPR003961 (1)
  • InterPro:IPR007110 (1)
  • InterPro:IPR013098 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR036116 (1)
  • InterPro:IPR036179 (1)
  • PROSITE:PS50835 (1)
  • PROSITE:PS50853 (1)
  • Pfam:PF00041 (1)
  • Pfam:PF07679 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mybpc1-001 (1) 4088
    mybpc1-002 (1) 314
    ncRNA mybpc1-003 (1) 569
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mybpc1 No data available
    MARKER RELATIONSHIPS
    mybpc1Contained in: [BAC] CH211-234F20 (1) (order this), DKEY-11K24 (1) (order this), DKEY-257I7 (1) (order this)
    mybpc1Encodes: [cDNA] MGC:92073 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007322 (1) 4177bp
    Genomic GenBank:BX890572 (1) 166208bp
    Select Tool
    Polypeptide UniProtKB:Q5U3B1 (1) 1168aa
    Sequence Clusters UniGene:87321 (1)
    Sequence Information (all 42)
    OTHER mybpc1 GENE PAGES
  • Alliance (1)
  • Gene:492356 (1)
  • VEGA:OTTDARG00000011273 (1)
  • Ensembl(GRCz11):ENSDARG00000045560 (1)
  • ORTHOLOGY for mybpc1 (Chr: 4)
    CITATIONS (30)