ZFIN ID: ZDB-GENE-041114-196
Gene Name: myosin binding protein C, slow type
Gene Symbol: mybpc1
Sequence Ontology ID : SO:0000704

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Previous Names: smbpc (1), zgc:92073 (1)

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 7 figures from 5 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
  heart tube, slow muscle cell, slow muscle cell striated muscle myosin thick filament, trunk skeletal muscle
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024461Tg Transgenic Insertion Unknown Unknown DNA
la024462Tg Transgenic Insertion Unknown Unknown DNA
sa153 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8977 Point Mutation Unknown Premature Stop ENU
    sa20253 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-mybpc1 (1), MO2-mybpc1 (1), MO3-mybpc1 (1), MO4-mybpc1 (1)
    PHENOTYPE
    Data: 4 figures from 2 publications
    Observed in: axis, brain, eye, hatching (all 15) expand
    DISEASE ASSOCIATED WITH mybpc1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    distal arthrogryposis Arthrogryposis, distal, type 1B 614335
    Lethal congenital contracture syndrome 4 614915
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process skeletal muscle fiber development (more)
    Cellular Component M band (more)
    Molecular Function actin filament binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003598 (1)
  • InterPro:IPR003599 (1)
  • InterPro:IPR003961 (1)
  • InterPro:IPR007110 (1)
  • InterPro:IPR013098 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR036116 (1)
  • InterPro:IPR036179 (1)
  • PROSITE:PS50835 (1)
  • PROSITE:PS50853 (1)
  • Pfam:PF00041 (1)
  • Pfam:PF07679 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mybpc1-001 (1) 4088
    mybpc1-002 (1) 314
    ncRNA mybpc1-003 (1) 569
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mybpc1 No data available
    MARKER RELATIONSHIPS
    mybpc1Contained in: [BAC] CH211-234F20 (1) (order this), DKEY-11K24 (1) (order this), DKEY-257I7 (1) (order this)
    mybpc1Encodes: [cDNA] MGC:92073 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007322 (1) 4177bp
    Genomic GenBank:BX890572 (1) 166208bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IA77 (1) 1169aa
    Sequence Clusters UniGene:87321 (1)
    Sequence Information (all 44)
    OTHER mybpc1 GENE PAGES
  • Alliance (1)
  • Gene:492356 (1)
  • VEGA:OTTDARG00000011273 (1)
  • Ensembl(GRCz10):ENSDARG00000045560 (1)
  • ORTHOLOGY for mybpc1 (Chr: 4)
    CITATIONS (29)