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ZIRC
ZFIN ID: ZDB-GENE-040614-3
Gene Name: intraflagellar transport 52 homolog (Chlamydomonas)
Gene Symbol: ift52
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in intraciliary transport; localizes to the axoneme and ciliary basal body; orthologous to human IFT52 (intraflagellar transport 52).
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la017692Tg Transgenic Insertion Unknown Unknown DNA
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ift52 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Short-rib thoracic dysplasia 16 with or without polydactyly 617102
DISEASE ASSOCIATED WITH ift52 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process intraciliary transport (more)
Cellular Component axoneme (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019196 (1)
  • InterPro:IPR029062 (1)
  • InterPro:IPR039975 (1)
  • Pfam:PF09822 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ift52-201 (1) 1961
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ift52 No data available
    MARKER RELATIONSHIPS
    ift52Contained in: [BAC] CH73-303B9 (1) (order this), CH211-266K22 (1) (order this)
    ift52Encodes: [cDNA] MGC:101779 (1) (order this), MGC:192660 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001001834 (1) 2011bp
    Genomic GenBank:AL935272 (1) 145553bp
    Select Tool
    Polypeptide UniProtKB:A8DZG0 (1) 435aa
    Sequence Clusters UniGene:15827 (1)
    Sequence Information (all 18)
    ORTHOLOGY for ift52 (Chr: 11)
    CITATIONS (29)