header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-740
Gene Name: zgc:55558
Gene Symbol: zgc:55558
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name:

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTP binding activity and GTPase activity; predicted to be involved in signal transduction; predicted to localize to the membrane; orthologous to human HRAS (HRas proto-oncogene,  ...

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6908969]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028863Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa7542 Point Mutation Unknown Missense ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:55558 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:55558 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process signal transduction (more)
    Cellular Component membrane (more)
    Molecular Function GTPase activity (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA zgc:55558-003 (1) 383
    mRNA zgc:55558-201 (1) 2183
    zgc:55558-202 (1) 1390
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:55558 No data available
    MARKER RELATIONSHIPS
    zgc:55558Contained in: [BAC] DKEY-29B22 (1) (order this)
    zgc:55558Encodes: [EST] IMAGE:6908969 (1) (order this), fc07f10 (1)
    [cDNA] MGC:55558 (1) (order this), MGC:174551 (1) (order this), MGC:192153 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200258 (1) 2175bp
    Genomic GenBank:CR847509 (1) 157983bp
    Select Tool
    Polypeptide UniProtKB:Q7ZUL8 (1) 187aa
    Sequence Clusters UniGene:78389 (1)
    Sequence Information (all 19)
    ORTHOLOGY for zgc:55558 (Chr: 3)
    CITATIONS (23)