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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-2861
Gene Name: short chain dehydrogenase/reductase family 16C, member 5b
Gene Symbol: sdr16c5b
Sequence Ontology ID : SO:0000704

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Previous Names: rdhe2, sdr16c5, wu:fj05d06, zgc:63829

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have oxidoreductase activity; predicted to localize to the lipid droplet; orthologous to human SDR16C5 (short chain dehydrogenase/reductase family 16C member 5).
GENE EXPRESSION
All Expression Data: Fig. 1 from Cheng et al., 2006
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016189Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa7094 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sdr16c5b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sdr16c5b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component lipid droplet (more)
    Molecular Function oxidoreductase activity (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sdr16c5b-201 (1) 1506
    sdr16c5b-202 (1) 891
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sdr16c5b No data available
    MARKER RELATIONSHIPS
    sdr16c5bContained in: [BAC] DKEY-29H18 (1) (order this), DKEY-171K22 (1) (order this)
    sdr16c5bEncodes: [EST] fj05d06 (1)
    [cDNA] MGC:63829 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214771 (1) 1500bp
    Genomic GenBank:BX323844 (1) 235079bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q7SZ49 (1) 306aa
    Sequence Clusters UniGene:105084 (1)
    Sequence Information (all 14)
    ORTHOLOGY for sdr16c5b (Chr: 7)
    CITATIONS (27)