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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-2442
Gene Name: claudin 5a
Gene Symbol: cldn5a
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: cldn5, zgc:85723

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have structural molecule activity. Involved in Kupffer's vesicle development; determination of heart left/right asymmetry; and establishment of endothelial barrier. Localizes to the  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016410Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41109 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH cldn5a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cldn5a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process determination of heart left/right asymmetry (more)
    Cellular Component apical junction complex (more)
    Molecular Function structural molecule activity (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cldn5a-201 (1) 1557
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cldn5a
    MARKER RELATIONSHIPS
    cldn5aContained in: [BAC] CH73-294L19 (1) (order this)
    cldn5aEncodes: [cDNA] MGC:85723 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213274 (1) 1632bp
    Genomic GenBank:FP085395 (1) 97354bp
    Select Tool
    Polypeptide UniProtKB:Q6NUZ6 (1) 215aa
    Sequence Clusters UniGene:78365 (1)
    Sequence Information (all 9)
    ORTHOLOGY for cldn5a (Chr: 8)
    CITATIONS (37)