ZFIN ID: ZDB-GENE-030131-9512
Gene Name: coronin, actin binding protein, 1A
Gene Symbol: coro1a
Sequence Ontology ID : SO:0000704

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Previous Names: fj83g12, wu:fj83g12 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 14 figures from 6 publications
Directly Submitted Expression Data: 7 figures (11 images) from Thisse et al., 2004 [MGC:63766]
Wild-type Stages, Structures: Blastula:256-cell (2.5h-2.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015166Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 4 figures from Blaker-Lee et al., 2012
    Observed in:
    DISEASE ASSOCIATED WITH coro1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    coronin-1A deficiency Immunodeficiency 8 615401
    DISEASE ASSOCIATED WITH coro1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process brain development (more)
    Cellular Component actin cytoskeleton (more)
    Molecular Function actin filament binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001680 (1)
  • InterPro:IPR015048 (1)
  • InterPro:IPR015505 (1)
  • InterPro:IPR015943 (1)
  • InterPro:IPR017986 (1)
  • InterPro:IPR019775 (1)
  • InterPro:IPR027340 (1)
  • InterPro:IPR036322 (1)
  • PROSITE:PS00678 (1)
  • PROSITE:PS50082 (1)
  • PROSITE:PS50294 (1)
  • Pfam:PF00400 (1)
  • Pfam:PF08953 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA coro1a-001 (1) 1813
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM coro1a
    MARKER RELATIONSHIPS
    coro1aContained in: [BAC] DKEYP-71F10 (1)
    coro1aEncodes: [EST] fj83g12
    [cDNA] MGC:63766 (1) (order this), MGC:175070 (1) (order this), MGC:198116 (1) (order this), MGC:198120 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201114 (1) 1766bp
    Genomic GenBank:CR936397 (1) 173317bp
    Select Tool
    Polypeptide UniProtKB:Q7SX58 (1) 455aa
    Sequence Clusters UniGene:9515 (1)
    Sequence Information (all 26)
    OTHER coro1a GENE PAGES
  • Alliance (1)
  • Gene:100002113 (1)
  • VEGA:OTTDARG00000019952 (1)
  • ORTHOLOGY for coro1a (Chr: 3)
    CITATIONS (40)