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ZIRC
ZFIN ID: ZDB-GENE-030131-9034
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Gene Name: ribosomal protein L4
Gene Symbol: rpl4    Nomenclature History

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Previous Names: fa97a02, fl04b10, wu:fa97a02, wu:fa97c01, wu:fl04b10, zgc:56659, zgc:85693

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to localize to the cytosolic large ribosomal subunit. Is expressed in digestive system; endodermal cell; and eye. Orthologous to human RPL4 (ribosomal protein L4).
Genome Resources: Alliance (1),  Gene:337090 (1),  Ensembl(GRCz11):ENSDARG00000041182 (2)
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7141844]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rpl4 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rpl4 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process translation (more)
Cellular Component ribosome (more)
Molecular Function structural constituent of ribosome (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002136 (1)
  • InterPro:IPR023574 (1)
  • InterPro:IPR025755 (1)
  • Pfam:PF00573 (1)
  • Pfam:PF14374 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rpl4-201 (1)    Ensembl 1422
    Select Tool
    ncRNA rpl4-002 (1)    Ensembl 813
    Select Tool
    rpl4-003 (1)    Ensembl 831
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rpl4 No data available
    MARKER RELATIONSHIPS
    rpl4 Contained in: [BAC] CH73-94F11 (1) (order this), CH211-242M18 (1) (order this)
    rpl4 Encodes: [EST] fa97a02, fa97c01, fl04b10, IMAGE:7141844 (1) (order this)
    [cDNA] MGC:56659 (1) (order this), MGC:85693 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213107 (1) 1285 bp
    Select Tool
    Genomic GenBank:CT863714 (1) 62423 bp
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    Polypeptide UniProtKB:Q7ZW95 (1) 375 aa
    Select Tool
    Sequence Clusters UniGene:125679 (1)
    Sequence Information (all 23)
    ORTHOLOGY for rpl4 ( Chr: 18 )
    CITATIONS (29)