ZFIN ID: ZDB-GENE-030131-825
Gene Name: casein kinase 1, delta a
Gene Symbol: csnk1da    Nomenclature History

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Previous Names: csnk1dl, wu:fb50c04, zgc:63971

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have protein serine/threonine kinase activity. Predicted to be involved in several processes, including organelle assembly; positive regulation of canonical Wnt signaling pathway; and positive regulation of proteasomal ubiquitin-dependent protein catabolic process. Predicted to localize to cytoplasm; nucleus; and spindle microtubule. Is expressed in several structures, including brain; head; pectoral fin; post-vent region; and tail bud. Human ortholog(s) of this gene implicated in advanced sleep phase syndrome 2. Orthologous to human CSNK1D (casein kinase 1 delta).
Genome Resources: Alliance (1),  Gene:322106 (1),  Ensembl(GRCz11):ENSDARG00000008370 (2)
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63971]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 6 (144.0h-168.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015192Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH csnk1da HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    advanced sleep phase syndrome 2 Alliance Advanced sleep-phase syndrome, familial, 2 615224
    DISEASE ASSOCIATED WITH csnk1da VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process phosphorylation (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA csnk1da-201 (1)    Ensembl 3578
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM csnk1da No data available
    MARKER RELATIONSHIPS
    csnk1da Contained in: [BAC] CH211-234H8 (1)
    csnk1da Encodes: [EST] fb50c04
    [cDNA] MGC:63971 (1)
    csnk1da Has Artifact: [cDNA] MGC:136231
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199583 (1) 3581 nt
    Genomic GenBank:BX897685 (1) 179286 nt
    Select Tool
    Polypeptide UniProtKB:Q7T2E3 (1) 403 aa
    Sequence Information (all 17)
    ORTHOLOGY for csnk1da ( Chr: 3 )
    CITATIONS (29)