ZFIN ID: ZDB-GENE-030131-7582
Gene Name: rogdi atypical leucine zipper
Gene Symbol: rogdi
Sequence Ontology ID : SO:0000704

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Previous Names: fj32e07, wu:fj32e07, zgc:55665

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Directly Submitted Expression Data: 4 figures (11 images) from Thisse et al., 2004 [MGC:55665]
Wild-type Stages, Structures: Cleavage:16-cell (1.5h-1.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rogdi HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Kohlschutter-Tonz syndrome 226750
DISEASE ASSOCIATED WITH rogdi VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component axon (more)
Molecular Function molecular_function (more)
GO Terms (all 15)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR028241 (1)
  • Pfam:PF10259 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rogdi-001 (1) 2061
    ncRNA rogdi-002 (1) 459
    rogdi-003 (1) 909
    rogdi-004 (1) 817
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rogdi No data available
    MARKER RELATIONSHIPS
    rogdiContained in: [BAC] CH211-214K13 (1) (order this)
    [Fosmid] CH1073-443F11 (1) (order this)
    rogdiEncodes: [EST] fj32e07
    [cDNA] MGC:55665 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199963 (1) 1970bp
    Genomic GenBank:BX908771 (1) 114109bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IF42 (1) 284aa
    Sequence Clusters UniGene:79522 (1)
    Sequence Information (all 15)
    OTHER rogdi GENE PAGES
  • Alliance (1)
  • Gene:335642 (1)
  • VEGA:OTTDARG00000037540 (1)
  • Ensembl(GRCz11):ENSDARG00000104413 (1)
  • ORTHOLOGY for rogdi (Chr: 3)
    CITATIONS (16)