ZFIN ID: ZDB-GENE-030131-5475
Gene Name: proline-rich nuclear receptor coactivator 2
Gene Symbol: pnrc2
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fb81a06, wu:cegs2777, wu:fb51a04, wu:fb81a06, wu:fd19g06

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 6 figures from 3 publications
Directly Submitted Expression Data: 4 figures (12 images) from Rauch et al., 2003 [cegs2777]
Wild-type Stages, Structures: Blastula:128-cell (2.25h-2.5h) to Adult (90d-730d, breeding adult)
  dorsal aorta, hypothalamus, otic vesicle, third ventricle (all 7) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
oz22 Small Deletion Unknown Unknown CRISPR
Targeting reagents: CRISPR1-pnrc2 (1), MO1-pnrc2 (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pnrc2 HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (more)
Cellular Component P-body (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR026780 (1)
  • InterPro:IPR026781 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pnrc2-001 (1) 3146
    ncRNA pnrc2-002 (1) 676
    mRNA pnrc2-003 (1) 183
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pnrc2 No data available
    MARKER RELATIONSHIPS
    pnrc2Contained in: [BAC] CH211-9M16 (order this), DKEY-66C10 (order this)
    pnrc2Encodes: [EST] cegs2777 (1) (order this), fb51a04, fb81a06, fd19g06, IMAGE:6805741
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001130192 (1) 3149bp
    Genomic GenBank:AL844887 (1) 243870bp Blast at MegaBLAST
    Polypeptide UniProtKB:B7TWP7 (1) 148aa
    Sequence Clusters UniGene:70123 (1)
    Sequence Information (all 25)
    OTHER pnrc2 GENE PAGES
  • Alliance (1)
  • Gene:565522 (1)
  • VEGA:OTTDARG00000027755 (1)
  • Ensembl(GRCz10):ENSDARG00000053291 (1)
  • ORTHOLOGY for pnrc2 (Chr: 16)
    CITATIONS (19)