ZFIN ID: ZDB-GENE-030131-4154
Gene Name: La ribonucleoprotein 1B
Gene Symbol: larp1b    Nomenclature History

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Previous Names: fc76b04, wu:fc76b04

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Orthologous to human LARP1B (La ribonucleoprotein 1B).
Genome Resources: Alliance (1),  Gene:568156 (1),  Ensembl(GRCz11):ENSDARG00000061169 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH larp1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH larp1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function RNA binding (more)
GO Terms (all 1)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Repeat IPR006607 Protein of unknown function DM15
Domain IPR006630 La-type HTH domain
Homologous_superfamily IPR036388 Winged helix-like DNA-binding domain superfamily
Homologous_superfamily IPR036390 Winged helix DNA-binding domain superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA larp1b-201 (1)    Ensembl 5067
larp1b-202 (1)    Ensembl 1725
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM larp1b No data available
MARKER RELATIONSHIPS
larp1b Contained in: [BAC] CH211-220O11 (1), DKEY-221L4 (1) (order this)
larp1b Encodes: [EST] fc76b04
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_005158557 (1) 5625 bp
Genomic GenBank:AL928908 (1) 229790 bp Blast at MegaBLAST
Polypeptide UniProtKB:F1Q931 (1) 1076 aa
Sequence Information (all 27)
ORTHOLOGY for larp1b ( Chr: 17 )
CITATIONS (20)