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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-2958
Gene Name: cleavage stimulation factor, 3' pre-RNA, subunit 1
Gene Symbol: cstf1
Sequence Ontology ID : SO:0000704

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Previous Names: fc22d10, wu:fc22d10, wu:fd16h09, zgc:66207, zgc:77560 (1)

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the mRNA cleavage stimulating factor complex. Orthologous to human CSTF1 (cleavage stimulation factor subunit 1).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66207]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH cstf1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cstf1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component mRNA cleavage stimulating factor complex (more)
GO Terms (all 1)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA cstf1-201 (1) 2053
cstf1-203 (1) 705
cstf1-204 (1) 851
cstf1-205 (1) 964
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM cstf1 No data available
MARKER RELATIONSHIPS
cstf1Contained in: [BAC] DKEY-14F19 (1) (order this)
cstf1Contains: [SNP] rs3728386 (1), rs3728387 (1), rs3728388 (1)
cstf1Encodes: [EST] fc22d10, fd16h09 (1)
[cDNA] MGC:66207 (1) (order this), MGC:77560 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_212670 (1) 1949bp
Genomic GenBank:BX601648 (1) 230457bp Blast at MegaBLAST
Polypeptide UniProtKB:F1QFK9 (1) 431aa
Sequence Clusters UniGene:78498 (1)
Sequence Information (all 25)
ORTHOLOGY for cstf1 (Chr: 11)
CITATIONS (17)