ZFIN ID: ZDB-GENE-030131-2220
Gene Name: farnesyltransferase, CAAX box, beta
Gene Symbol: fntb
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fb99h09, zgc:86774

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to protein farnesyltransferase activity; involved in cardiac ventricle development; predicted to localize to the protein farnesyltransferase complex; orthologous to several  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6900012]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 2 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH fntb HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH fntb VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cardiac ventricle development (more)
Cellular Component protein farnesyltransferase complex (more)
Molecular Function catalytic activity (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001330 (1)
  • InterPro:IPR008930 (1)
  • InterPro:IPR026872 (1)
  • Pfam:PF00432 (1)
  • EC:2.5.1.58 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA fntb-002 (1) 692
    mRNA fntb-201 (1) 1665
    fntb-203 (1) 574
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM fntb No data available
    MARKER RELATIONSHIPS
    fntbContained in: [BAC] DKEY-11E23 (1) (order this), DKEY-263P20 (1) (order this)
    fntbEncodes: [EST] fb99h09, IMAGE:6900012 (1) (order this)
    [cDNA] MGC:86774 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002128 (1) 1693bp
    Genomic GenBank:AL928866 (1) 249759bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QF89 (1) 449aa
    Sequence Clusters UniGene:77794 (1)
    Sequence Information (all 18)
    OTHER fntb GENE PAGES
  • Alliance (1)
  • Gene:323500 (1)
  • VEGA:OTTDARG00000005830 (1)
  • Ensembl(GRCz11):ENSDARG00000027916 (2)
  • ORTHOLOGY for fntb (Chr: 20)
    CITATIONS (23)