ZFIN ID: ZDB-GENE-030131-1957
Gene Name: ChaC, cation transport regulator homolog 1 (E. coli)
Gene Symbol: chac1
Sequence Ontology ID : SO:0000704

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Previous Names: cb1014 (1), mgc4504, wu:fb93a10 (1), wu:fp64e03

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
Directly Submitted Expression Data: 3 figures (5 images) from Thisse et al., 2001 [cb1014]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH chac1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH chac1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process negative regulation of Notch signaling pathway (more)
Cellular Component trans-Golgi network (more)
Molecular Function Notch binding (more)
GO Terms (all 16)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006840 (1)
  • InterPro:IPR013024 (1)
  • InterPro:IPR036568 (1)
  • Pfam:PF04752 (1)
  • EC:4.3.2.- (1)
  • EC:4.3.2.7 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA chac1-001 (1) 1562
    ncRNA chac1-002 (1) 811
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM chac1 No data available
    MARKER RELATIONSHIPS
    chac1Contained in: [BAC] CH211-244P18 (1) (order this), DKEY-14A13 (1) (order this)
    chac1Encodes: [EST] cb1014 (1) (order this), fb93a10, fp64e03
    [cDNA] MGC:162352 (1) (order this), MGC:173476 (1) (order this), MGC:173477 (1) (order this), MGC:173478 (1) (order this), MGC:198364 (1) (order this), MGC:198366 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001110126 (1) 1521bp
    Genomic GenBank:AL929049 (1) 223182bp Blast at MegaBLAST
    Polypeptide UniProtKB:A4QNY6 (1) 196aa
    Sequence Clusters UniGene:76600 (1)
    Sequence Information (all 42)
    OTHER chac1 GENE PAGES
  • Alliance (1)
  • Gene:563855 (1)
  • VEGA:OTTDARG00000005140 (1)
  • Ensembl(GRCz11):ENSDARG00000070426 (2)
  • ORTHOLOGY for chac1 (Chr: 20)
    CITATIONS (25)