header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-1613
Gene Name: otopetrin 1
Gene Symbol: otop1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: backstroke, bks, wu:fb76b02 (1), zgc:103626

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have proton channel activity. Involved in otolith formation and otolith mineralization. Predicted to localize to the integral component of plasma membrane. Orthologous to human OTOP1  ...
GENE EXPRESSION
All Expression Data: 10 figures from 4 publications
Directly Submitted Expression Data: 7 figures (14 images) from Thisse et al., 2004 [MGC:103626]
Wild-type Stages, Structures: Blastula:Sphere (4.0h-4.33h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
tm317d Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH otop1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH otop1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process inner ear morphogenesis (more)
    Cellular Component integral component of membrane (more)
    Molecular Function proton channel activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM otop1 No data available
    MARKER RELATIONSHIPS
    otop1Encodes: [EST] fb76b02
    [cDNA] MGC:103626 (1) (order this), MGC:191835 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198803 (1)
    Genomic GenBank:CABZ01086808 (1) 5616bp
    Polypeptide UniProtKB:Q7ZWK8 (1)
    Sequence Clusters UniGene:77257 (1)
    Sequence Information (all 23)
    OTHER otop1 GENE PAGES
  • Alliance (1)
  • Gene:322893 (1)
  • ORTHOLOGY for otop1 (Chr: 14)
    CITATIONS (26)