ZFIN ID: ZDB-GENE-030131-102
Gene Name: connective tissue growth factor a
Gene Symbol: ctgfa
Sequence Ontology ID : SO:0000704

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Previous Names: ctgf, hm:zeh1559, si:dkey-266k12.4, wu:fl25c03 (1), zCTGF-c20 (1), zgc:136644

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 25 figures from 11 publications
Directly Submitted Expression Data: 7 figures (12 images) from Thisse et al., 2005 [eu936]
  8 figures (24 images) from Rauch et al., 2003 [cegs2096]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
bns50 Small Deletion Exon 3 Frameshift, Premature Stop TALEN
el654 Small Deletion Unknown Unknown CRISPR
sa11839 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa13699 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa25135 Point Mutation Unknown Premature Stop ENU
    Targeting reagents:
    PHENOTYPE
    Data: 3 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH ctgfa HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chordate embryonic development (more)
    Cellular Component extracellular region (more)
    Molecular Function insulin-like growth factor binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000867 (1)
  • InterPro:IPR000884 (1)
  • InterPro:IPR001007 (1)
  • InterPro:IPR006207 (1)
  • InterPro:IPR006208 (1)
  • InterPro:IPR009030 (1)
  • InterPro:IPR012395 (1)
  • InterPro:IPR036383 (1)
  • PROSITE:PS01185 (1)
  • PROSITE:PS01208 (1)
  • PROSITE:PS01225 (1)
  • PROSITE:PS50092 (1)
  • PROSITE:PS50184 (1)
  • PROSITE:PS51323 (1)
  • Pfam:PF00007 (1)
  • Pfam:PF00090 (1)
  • Pfam:PF00093 (1)
  • Pfam:PF00219 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ctgfa-001 (1) 2119
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ctgfa
    MARKER RELATIONSHIPS
    ctgfaContained in: [BAC] DKEY-266K12 (1) (order this)
    ctgfaEncodes: [EST] cegs2096 (1) (order this), eu936 (1), fl25c03, zeh1559 (1)
    [cDNA] MGC:136644 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001015041 (1) 2119bp
    Genomic GenBank:BX323010 (1) 176396bp
    Select Tool
    Polypeptide UniProtKB:Q5RI33 (1) 345aa
    Sequence Clusters UniGene:42794 (1)
    Sequence Information (all 31)
    OTHER ctgfa GENE PAGES
  • Alliance (1)
  • Gene:321449 (1)
  • VEGA:OTTDARG00000006901 (1)
  • Ensembl(GRCz10):ENSDARG00000042934 (1)
  • ORTHOLOGY for ctgfa (Chr: 20)
    CITATIONS (59)