ZFIN ID: ZDB-GENE-021011-1
Gene Name: translocation associated membrane protein 1
Gene Symbol: tram1
Sequence Ontology ID : SO:0000704

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Previous Names: tram, cb289 (1), etID7103.20 (1), etID7103.24 (1), wu:fb67f10 (1), wu:fc67b03 (1), wu:fi09h09

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane, translocation; predicted to localize to the rough endoplasmic reticulum; orthologous to several human genes  ...
GENE EXPRESSION
All Expression Data: 12 figures from 5 publications
Directly Submitted Expression Data: 6 figures (20 images) from Thisse et al., 2001 [cb289]
Wild-type Stages, Structures: Blastula:128-cell (2.25h-2.5h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la022849Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37843 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tram1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tram1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006634 (1)
  • InterPro:IPR013599 (1)
  • InterPro:IPR016447 (1)
  • PROSITE:PS50922 (1)
  • Pfam:PF03798 (1)
  • Pfam:PF08390 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tram1-201 (1) 2407
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tram1 No data available
    MARKER RELATIONSHIPS
    tram1Contained in: [BAC] DKEY-19O24 (1) (order this), DKEY-237J21 (1) (order this)
    tram1Encodes: [EST] cb289 (1) (order this), fc67b03 (1), fi09h09 (1)
    [cDNA] MGC:56707 (1) (order this), MGC:77821 (1) (order this)
    tram1Has Artifact: [EST] fb67f10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_153669 (1) 2239bp
    Genomic GenBank:BX510326 (1) 239398bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6P4U7 (1) 369aa
    Sequence Clusters UniGene:126230 (1)
    Sequence Information (all 23)
    OTHER tram1 GENE PAGES
  • Alliance (1)
  • Gene:266757 (1)
  • VEGA:OTTDARG00000021375 (1)
  • ORTHOLOGY for tram1 (Chr: 24)
    CITATIONS (33)