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ZIRC
ZFIN ID: ZDB-GENE-020419-29
Gene Name: scavenger receptor class B, member 2a
Gene Symbol: scarb2a
Sequence Ontology ID : SO:0001217

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Previous Names: cd36l2, scarb2 (1), CD36 antigen-like 2 (1), chunp6914, fi13c07, wu:fi13c07 (1)

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have scavenger receptor activity. Involved in notochord development. Predicted to localize to the integral component of membrane and lysosome. Human ortholog(s) of this gene implicated  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1463Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi2715Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH scarb2a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    progressive myoclonus epilepsy 4 Epilepsy, progressive myoclonic 4, with or without renal failure 254900
    DISEASE ASSOCIATED WITH scarb2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process notochord development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function scavenger receptor activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002159 (1)
  • InterPro:IPR005429 (1)
  • Pfam:PF01130 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM scarb2a No data available
    MARKER RELATIONSHIPS
    scarb2a Encodes: [EST] eu664 (1), fi13c07 (1)
    [cDNA] MGC:194067 (1) (order this), MGC:194090 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173259 (1)
    Genomic GenBank:DU644818 (1) 518 bp
    Polypeptide UniProtKB:Q8JGR8 (1) 531 aa
    Sequence Clusters UniGene:75656 (1)
    Sequence Information (all 20)
    OTHER scarb2a GENE PAGES
  • Alliance (1)
  • Gene:192340 (1)
  • Ensembl(GRCz11):ENSDARG00000098312 (1)
  • ORTHOLOGY for scarb2a ( Chr: 5 )
    CITATIONS (27)