ZFIN ID: ZDB-GENE-010413-1
Gene Name: signal sequence receptor, beta
Gene Symbol: ssr2
Sequence Ontology ID : SO:0000704

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Previous Names: translocon-associated protein beta (1), TRAP[b] (1), wu:fb75b04, zgc:92180

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: text only from Mangos et al., 2000
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ssr2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ssr2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cotranslational protein targeting to membrane (more)
Cellular Component endoplasmic reticulum (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008856 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ssr2-001 (1) 1043
    ssr2-002 (1) 414
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ssr2 No data available
    MARKER RELATIONSHIPS
    ssr2Contained in: [BAC] CH73-109I22 (1) (order this)
    ssr2Encodes: [EST] fb75b04
    [cDNA] MGC:92180 (1) (order this)
    ssr2Has Artifact: [EST] fa94g04
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001001399 (1) 989bp
    Genomic GenBank:FP074861 (1) 55347bp
    Select Tool
    Polypeptide UniProtKB:F8W477 (1) 186aa
    Sequence Clusters UniGene:1209 (1)
    Sequence Information (all 18)
    OTHER ssr2 GENE PAGES
  • Alliance (1)
  • Gene:83414 (1)
  • VEGA:OTTDARG00000034700 (1)
  • Ensembl(GRCz11):ENSDARG00000005230 (2)
  • ORTHOLOGY for ssr2 (Chr: 19)
    CITATIONS (18)