Genomic Feature

uva7

ID
ZDB-ALT-200116-2
Name
uva7
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
Lab of Origin
Kucenas Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 21: 13302060 - 13302061 (GRCz11) (1) Details
Nucleotide change
TC/CGTTATATTTATTGACACATATATTGACACATATGTTATATGTGTCATATATTTATTGATACATATAA
Variant Notes
This allele lacks all conserved ligand binding
domains and C-terminal signaling.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
68 bp inserted / 2 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GGGAGTCGATTCATGCAGTCTAGCAGCTGTTTCCTTTACGACTCTGAATGAAAGCCGTTGTGAGCTGGACCTAAGGGACAGTCCGGTAAACGGGTAAATCAAGGTTTGCGAAAGTGTGTCTGCGCAGACCCTCCACTTACTGTAGTGACTCCCAAAGTGTATTTTCTACCACATCATTCCCTTCAAACTCAGGCGGAATGGTTGGGCTGGCTAGTCCTCACACCTACTGCAAGAGCTATTGAGTGGCGGAGTGAGGTCCCACTGAGCAATTATCGGGAGCACAACTATGTGTGTCCCTGAGGATATCCTTTCACACTGGTTGATAGCACCATGTCTTCTCTCGTCTACATTGTTCTTGAACTGGTGATTGCGGTTTTGGCCGTGGCTGGAAATGTTTTGGTGTGCTGGGCCGTCTGCCTCAACAGCAACCTTCAGAGCATCACTAACTTCTTTGTGGTGTCGTTGGCCGTGGCGGACATTGCAGTCGGAGTCCTGGCCAT
TC/CGTTATATTTATTGACACATATATTGACACATATGTTATATGTGTCATATATTTATTGATACATATAA CATTTGCCGTCACCATCAGCATCGGCTTCTGCAGCAATTTTCATGGATGCCTCTTCATCGCTTGCTTTGTGCTGGTCCTCACGCAGAGCTCCGTCTTCAGTTTGTTGGCCATTGCCGTGGATCGATACATCGCCATCAAGATCCCATTGAGGTGAGTGAACAGCCGTGTATTGGTTGAAGGCAGACATTTTATAAGAGGATTAATGATCACATGGTAACTTGAAAGAGCAGATTGTTTTGCCCAACAGCAAAACATACAGTTTTTCTCATTTGAAATACCAGCACATTCTGGTTATTATTTGTTGTGAAAAATACATCAAAATTAAGACTGAAAACCAAACTGAAATTTAGTCTTTCTTTTTGTCAAGGCAATAGCTCACAGGGGTCAAATTAAATGTGTTTTTTAAATTCAGCCCATATTCCCATATATAAATCTGATACATGTAAATGTAAATATATGTAAGTTGCATGGATGATATGCAACTTTGGATTTTAAATAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations