Genomic Feature

uc38

ID
ZDB-ALT-170117-5
Name
uc38
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Draper Laboratory
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 39636088 - 39636095 (GRCz11) (1) Details
Nucleotide change
CTGATGGC/-
Variant Notes
stop in Cytochrome P450 domain
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ATTAATAGGTTGTAGTTGGGTTTAGGTATTAGATAGAATTAGATATATCAAATAAAATCATACTATATAAGTGCTAATAAACAGTTATTATTTTATTAATAGGCAACCAGTAGAAAATGGTGTGATTTGTTACTTAATCTAACTTAGCACATTTTTTACAGGTTACCACAGTTAAATAGACTTAAAATGGGTGCATAAATGATTGTAACCCCAGAAAATAATTTAAATCCTTTTATTGACATATGATTAGGTTCATTTCTTAAAACTTAATTAAAATACGTACAGGTTACAAATAGCAACATGTAAATAAGTTACCTGTAACAATGAAAGTAGGTTTACCGGCTTGAGTAATTTACAAATATAAATTATCTCTACAGTAGGTATTACTTTTTACATTGTGTGTATTTAAAAAAAACAACAATCTGCAAAATAAGAACGTAAAAAACGTCTGAAACAAATCCAACTGACCTGGAATGTGTGATTTGTGTGGTCGATGGTGT
CTGATGGC/- CAGCAGCAGGCAGAGTAGCAGCAGCAGTATTGTAGCTGTAGCTCCACACGCATTGTCCTGAGCCCTTTCAGTGCCGTTATGAGCCCTTTGGATAAGAAGATCCACCACAGCCTCGCCGAGACGCACCGGCTTCATTCCACAGGGCTGGAGCAGATCACCTGCCATAAGAACGGATTAAGAAGCAAGTCTAAAGCCTCTGAACTGCAGACGTACACTTTTATATCCCAGCAGCTGCATGGGACTCAATCAGGATAATTCAAAAGTCAAAATAAAAACGCTGCGTAACCTTGTGTGCTCCTTTGTGTCCTTCAGCGTCGAGTTTCCAAAACATTTACCATGACACTCAAACCCTCAGCTGTGTGCAAGTCATCTCTGGGTTTTCATCAGGACTTCAAAGACTTGAAAGGATATTAGACATCTGCGGCACGTCCTCGAGTTATTCTACAGCAGTCAAATGAGAAAACATCAGGCCTACAAACAAACAAAAAGTGTCCTTATTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations