Genomic Feature

um193

ID
ZDB-ALT-140917-6
Name
um193
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sagerström Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 3: 23768979 - 23768986 (GRCz11) (1) Details
Nucleotide change
TGTAACCG/-
Variant Notes
Weicksel et al, 2014: Deletion (−8 bp) in exon1 of hoxb1a
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AAGATAGCACATTCGTAATTAAACTGGTGCGATTAAAATTAGAAACTAATGGCAGGTTAAAAGATGCAAGGGGATGAAGAAAAATCTCAATGCAAAAGTCTGAAGCGCTCTTTCTTTATTTCTTTTTCTCTCATTCGGAGAGCCTTTCACGCAGGGTTTGACATATTCTAGCTGTTATCAGATTGATGGGCTGGTTTGATTGAAGTGGCTTTGTCATGCAAATGTCAAGCGCGTGATGGATGGTCGCCGTGCGCTGACAAACTTCTGGAGGTCCCCTCACCATTGGCGCCGTGACGTCTCACGTGACCAGCAGCTGAGGTAAAGATGTGTTATAGGGAAGCACGAGCAAATACTCCAGAGGTAAGCATTTCCCCCCTTCCGCATGACATACTATTGCGAGCTTACAGGACAGGAGGCTTTCTCGATTTCTCAGGTTGTCCCTCCGCCATTAATTGCGTATGGACAGTTCCAGAATGAACTCTTTCTTGGAGTACACAATT
TGTAACCG/- TGGGACGAACGCCTACTCGCCCAAGGCTGGATACCACCACTTGGACCAGGCGTTCCCGGGCCCTTTCCACACTGGACACGCTAGTGACAGCTATAACGCTGATGGACGACTTTACGTAGGGGGGAGCAATCAGCCACCAACAGCAGCAGCACAACATCAGCACCAGAACGGCATCTACGCGCATCACCAGCACCAAAATCAAACTGGCATGGGCCTTACCTATGGTGGAACTGGGACAACAAGTTATGGGACACAGGCCTGCGCCAACTCGGACTATGCTCAACACCAGTATTTTATCAACCCTGAGCAGGATGGGATGTATTATCACTCATCAGGTTTTTCAACATCAAATGCCAGTCCACACTATGGCTCTATGGCCGGTGCGTACTGCGGGGCACAGGGAGCCGTTCCAGCCGCACCTTATCAGCATCATGGATGCGAAGGCCAGGATCACCAGCGAGCATATTCACAAGGCACCTACGCTGACTTATCGGCCTCTC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations