Genomic Feature

p6cv

ID
ZDB-ALT-060803-2
Name
p6cv
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
Lab of Origin
Mullins Laboratory
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 19: 35119061 - 35119091 (GRCz11) (1) Details
Nucleotide change
CGTGCGTCCCTGCAGTCGCTCTGAGAGCCCA/-
Variant Notes
This allele has a 31 base pair deletion in the coding sequence of the macf1  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
31 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation: at position 5315 in RefSeq:XP_001920094.1 (1)
Sequences
Flanking Sequence
AAAAGATTACAAGATATGAAAATGACAAGACCAGACAAATCTGGAGCAAGCCAGAAAAAGACTGTCTTATTTCAGCAGACACGACATGAACGCAGACACAACTACAGATCGGGTTTTATATATAACCTTCTGACACATTCCAGGGGCTCCTGATCATGTGCAAATTCTCTCACCTTCTCAGTAACTTCTTCAAACTCTTTTTCCGTATCGCAAGCTTGCTGCAGCAGCTTCTGGCCTCCATCTTGGCCGGCTGCAGATATCTGGGGTGCGTCCTGCAGCAGTCCCTGAGCCAGATTTCGGAGGTACACCACCTGTGGCTGTACAGAGTTTAACAGCTCCTGTTGGCTTCGCAGACGCTCCAGGCTTTTGTTGCTACAAGCTTGTGGTCCAAGCGCCTCTTGAACCTCGATCTGATGCCTGGCAGCTTCTAGTCTTCTTTCCACAGCCTGTCTGCCATCCTCAAACTCTTTCAATCTGCTTCCTAACTCCTCAAGCTGAGC
CGTGCGTCCCTGCAGTCGCTCTGAGAGCCCA/- TCTACTCTACGATTGAGCTGTGCCTTTTCATCTCTCACTTCCTCTTCGCCAGTGCAGCTCTGCTCCAGCAACTGATCGGCTGCTGTGTTCAGAGACTCTAAAAGTGGTCGTCGGCGATCCAGATCAAGACTCAACTGTCTAGCCTTCTGCAAAGAGTCGTCTAAGACAGCAGCATCCAGCGATGGGTTGATTTCTGCCTCCTTTACCTCACATTCCGCAATCCACGGCACAAGCTCATTGCGATGTTGTTGGTACAGCTCAGCACGGGTCAGTGTCTCTTTTATCCGGCAATGTTTCTCTGACGCATGTTGGTTTAAGACCTCCCAGTCTTGCCGTAAGTTGTTCAAGCGAGTCTGTAAGGCTAACCGCTCATCTCCCGCAGGAAGGGATGCCAGGAGAGATGCTCCCTCAGCCTGGATAAGCTCGTAGGATCCGCGTTGTTGTGCTATGGCTCGCTGGAAATCCTCTTGTTGGGTGAGAAGGGTCTTCAGAGCGTCAGG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations